Gene MCAP_0712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCAP_0712 
SymbolligA 
ID3829023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycoplasma capricolum subsp. capricolum ATCC 27343 
KingdomBacteria 
Replicon accessionNC_007633 
Strand
Start bp825742 
End bp827748 
Gene Length2007 bp 
Protein Length668 aa 
Translation table
GC content23% 
IMG OID637823864 
ProductDNA ligase, NAD-dependent 
Protein accessionYP_424672 
Protein GI83319601 
COG category[L] Replication, recombination and repair 
COG ID[COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) 
TIGRFAM ID[TIGR00575] DNA ligase, NAD-dependent 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAAAG AACAAATTCT ACTAAGAATT AATCAATTAA AAGAACAGTT AAACTTATGA 
TCAAAACAAT ATTATGTTGA TGATAACCCA AGTGTTGATG ATACTGAATA TGATTTAGCT
TTAAAAGAAC TAATTAGTTT AGAAAATTTA TATCCTGAAT TTATTACTAG TGATTCACCT
AGTCAAAAAG TTGGTGGAAC AGTTAGTGAA AAGTTTTTAA AAATAACTCA TAAAACACCA
ATGTTAAGTT TAGGTAATGT TTTTAATTTT GATGAATTTT TAGAATTTAA TACTCAAGTA
AGTAAAGTTT CAAATAATTT AAATAATGAA TATGTAGCTG AATTAAAAAT TGATGGTTTA
TCAATTTCAT TAGTTTATGA AAATGGAGTT TTAGTATCAG CTGCTACTAG AGGTAATGGA
GTAATTGGTG AAGATGTTAC TACTAATGTA AGAACTATTA AATCCATTCC TTTAAAAATT
AGTAAAAAAG AACGTGTTGA AGTTAGAGGA GAAATTTATT TATCTAAAGC TGAGTTTGAA
AAAATCAATC AAAAAAGATT ATTAAATAAT GAAGATTTAT TTATAAATCC AAGAAATGCA
GCTGCTGGTA CTTTAAGACA GTTAGATTCA AAAATAGTTG CAAGTAGAAA TCTTGATGCT
TTTTTATATT ATTACATTAG TGATGATTCA CCTAATCTTA ATCAATATGA ATCTATTTTA
AAACTAAATC AGTTAGGTTT TAAAACTAAT AAAGAAACAA TGTTATGTAA AAATTTAGAT
CAAATTAAAG CATATATTGA TAAATATACT AATTTAAAAA ATGATTTAGA TTATCAAATT
GATGGAATTG TATTTAAAAT TAATGATAAA AATTTACAAA ATAGTTTAGG ATTCACTAGT
AAGATTCCAA AGTGAGCAAT TGCTTATAAG TTTCCAGCTG AAATCAAGCA AACTAAACTA
TTAGATATAT TTGCTACAGT TGGAAGAACT GGAAAAATTA CTTATAATGC TAAACTTGAG
CCTGTTTTTT TAATGGGAGC TACAATTAGT GCTGCTACTT TAAATAATGC AGAATATATT
AAGTCAAAAG ATTTAAGAAT TAATAGTATA GTTAAAATAA AAAAAGCTGG AGATGTTATT
CCAGAAGTTA TTGAAGCTAT TAAAGATGAA ACTTTTTATA ACTTAGAAGT TTTTCAACCT
ATATTATATT GTCCAAATTG TCATTCTTTA TTAGAAAAAA ATGAAAATGA AGTTGATCAG
TTTTGTATAA ATTCTTCTTG TTCTATGAAA ATATTAAGAT CATTACAACA TTTTAGTAGT
AGAGAAGCTA TGAATATTGT TAGTTTAGGA GATAGAAGTT TAGAAATTTT ATTTAATTTA
GAAATTATTC AAAATATTTC AGATATTTAT AAGTTAGAAG AATATAAAGA TCAGATTTTA
GCAATTGAAA ATTTTGGTTT AAAAAGCTAT TTAAATTTAA TTGATTCAAT TAATATGTCT
AAAAACAATT CTTTAGAAAA AGTTTTATTT GGTTTAGGAA TTAGACATAT TGGAAGTAAA
ACTGCAAAAA TTTTAGCTAG AAAATATCAA AATATAGATA ATTTAATGAA AGCTAGTTAT
GATGAATTAA TTCAAATAAA TTCAATTGGA GAATCATTAG CTTTATCTAT TATTGATTGA
TTTAAAATAG AAGATAATTT AAAACTAATT AATGAGCTAA AATCATTTAA CATCAATTTT
AATTATTTAG GAGCAAAAAT TAATTCTGAT TCAATAATTG CTAATAAAAC ATTTGTAATT
ACTGGAACTT TAACAAGACC AAGAGAAGAA TTTAAAACAT TAATTGAAAA TAATGCTGGT
AAGATAAGTG GTTCAATTTC TAAACAAACT GACTATTTAT TAGCTGGTAA TAATGTGGGT
TCTAAACTAG AAAAAGCAAA AAAATTAGGT GTTATAATTA TAGATGAACA ACAGTTTTTT
GATTTATTAA AATCAGAGAA AGGATAA
 
Protein sequence
MSKEQILLRI NQLKEQLNLW SKQYYVDDNP SVDDTEYDLA LKELISLENL YPEFITSDSP 
SQKVGGTVSE KFLKITHKTP MLSLGNVFNF DEFLEFNTQV SKVSNNLNNE YVAELKIDGL
SISLVYENGV LVSAATRGNG VIGEDVTTNV RTIKSIPLKI SKKERVEVRG EIYLSKAEFE
KINQKRLLNN EDLFINPRNA AAGTLRQLDS KIVASRNLDA FLYYYISDDS PNLNQYESIL
KLNQLGFKTN KETMLCKNLD QIKAYIDKYT NLKNDLDYQI DGIVFKINDK NLQNSLGFTS
KIPKWAIAYK FPAEIKQTKL LDIFATVGRT GKITYNAKLE PVFLMGATIS AATLNNAEYI
KSKDLRINSI VKIKKAGDVI PEVIEAIKDE TFYNLEVFQP ILYCPNCHSL LEKNENEVDQ
FCINSSCSMK ILRSLQHFSS REAMNIVSLG DRSLEILFNL EIIQNISDIY KLEEYKDQIL
AIENFGLKSY LNLIDSINMS KNNSLEKVLF GLGIRHIGSK TAKILARKYQ NIDNLMKASY
DELIQINSIG ESLALSIIDW FKIEDNLKLI NELKSFNINF NYLGAKINSD SIIANKTFVI
TGTLTRPREE FKTLIENNAG KISGSISKQT DYLLAGNNVG SKLEKAKKLG VIIIDEQQFF
DLLKSEKG