Gene MCAP_0670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCAP_0670 
SymbolrpoA 
ID3828381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycoplasma capricolum subsp. capricolum ATCC 27343 
KingdomBacteria 
Replicon accessionNC_007633 
Strand- 
Start bp799537 
End bp800490 
Gene Length954 bp 
Protein Length317 aa 
Translation table4 
GC content27% 
IMG OID637823822 
ProductDNA-directed RNA polymerase subunit alpha 
Protein accessionYP_424634 
Protein GI83319728 
COG category[K] Transcription 
COG ID[COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit 
TIGRFAM ID[TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAAT TTGTGAGACC AGAATTTATT CTTTTAAAAG AAGGACAAGA TAAAAATTAC 
GGAAAATTTA GTGTATCGCC TCTAGAAAGA GGGTTTGGTA TAACTTTAGG TAATGCGATT 
AGAAGAACTT TATTAGCAGC AACTCCCGGA GCAAGTGTTT ATGCGATAAA AATTGCTGGG 
GCAACTCATG AATTTACTTC AATTCCAGGA ATTATTGAAA ATGTTACTAA AATTATTTTA 
AATATTAAAC AATTAGTTTT AAGAATTGAT ACTTCTATAT ATAGTGATGA TGAAGTTGTA 
CAATTAAAAA TTCGTTCTGA TATTCAAGGT CCTGTATATG CTGGTGATTT AGAATTACCA 
GCTGGTGTAG AAGTTTTAAA TCAAGATTTA TTAATAGCAA CTATTAGTGA GGGTGGAATT 
TTAGATTTAG TTTTATATGC TAAAAATTCA CGTGGTTATA AGACTTTTAA AGATAATAAA 
AATGAAAAAA ATATTGAACC AGGAATGATT ACAATTGATT CAAACTACTC ACCAATTATT 
AAAGTTGCAT ATAGTGTAGA TTCAGCAAAA ATTGGAAGAG CTATTGATCT TGAAAAATTA 
GAATTAGAAG TTACAACTGA TGGTTCAATT ACTGCAATTG ATGCAATTAG TATTGCTTCT 
AAAATTTTAG TTGCTCATTT AGAATTTTTT ATTGATCTAA ATCGTGAAAT CAGTGTATTA 
GAAGTTATTG GTGTAAATCA AACTGATGAT AAAGAATTAG ATAGAACAGT TGAAGAATTA 
GATTTTACAC AAAGAAGTTT AAATTGTTTA AAACGTGCTG GAATAAATAC ATTAAGAGAA 
TTAGTTACTA AAAATGAAGA CGAAATAGGT TCAATAAGAA ATCTAGGACG TAAATCATTA 
AAAGAAATTA AAGATAAAGT TGCTTCATTA GGATTAGCAT TTAGACAATC ATAA
 
Protein sequence
MKQFVRPEFI LLKEGQDKNY GKFSVSPLER GFGITLGNAI RRTLLAATPG ASVYAIKIAG 
ATHEFTSIPG IIENVTKIIL NIKQLVLRID TSIYSDDEVV QLKIRSDIQG PVYAGDLELP 
AGVEVLNQDL LIATISEGGI LDLVLYAKNS RGYKTFKDNK NEKNIEPGMI TIDSNYSPII 
KVAYSVDSAK IGRAIDLEKL ELEVTTDGSI TAIDAISIAS KILVAHLEFF IDLNREISVL 
EVIGVNQTDD KELDRTVEEL DFTQRSLNCL KRAGINTLRE LVTKNEDEIG SIRNLGRKSL 
KEIKDKVASL GLAFRQS