Gene MCAP_0326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCAP_0326 
Symbol 
ID3829091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycoplasma capricolum subsp. capricolum ATCC 27343 
KingdomBacteria 
Replicon accessionNC_007633 
Strand
Start bp390352 
End bp391230 
Gene Length879 bp 
Protein Length292 aa 
Translation table
GC content21% 
IMG OID637823484 
ProducttRNA pseudouridine synthase B, putative 
Protein accessionYP_424311 
Protein GI83319374 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0130] Pseudouridine synthase 
TIGRFAM ID[TIGR00431] tRNA pseudouridine 55 synthase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.541699 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAT CAGGTATTTT TATTTTAAAT AAACCAAAAA ATATATCAAC TTATCAATTA 
ATTAATCAAG TTAAAAAAAA GTTAAATATC AAAAAAGTTG GTCATTGTGG TACTTTAGAT
TTACTAGCAA CTGGAGTTGT TATTTGCTTA GTGAATAATG CTACTAAAAT TAGTGATTAT
TTATTAAATG CTAATAAGGC TTATCAAGTA AAAATTAAAT TATTTACATT AACTGATAGT
TATGATGGTG AAGGAAATAT AATTCAAACT CAAATTCCTT TTGATATTAG TTTAGATCAA
ATAAATAAAG TAATTAGTAA ATATAATAAT TATTCTTATG AACAATACCC ACCAATTTAT
TCATCTATAA AAGTTAATGG TAAAAAACTT TATCAATATG CTTTAGCTAA TCAAGATGTT
GAAATAAAAA GTAGAAAAGT AACTATTTTT AAAACTAAAT TATTAAATTA TGATCAAAAA
AACTATGAGA TTTTTTTAGA TGTTAAGTGT AGTAAAGGAA CTTATATTAG AAGTTTAGCT
ATTGATATTT GTAAAGATTT AAACACAATT GGGTATGTAG TTGAACTTAA TAGAACCTTA
TCTGGTAACT TTGATATAAA TAGTGCAATT GACATAAAAG ATTTAAGTTG AAAACATTTA
ACTTCAATAT ATGATGCTGT TAAAATTAAT GATTTTAAAG TTGTTAAATA TCATAATATT
TTAGATGTTA AACAAGGAAA AAAAATAGTT TTAAATAATA TTAAAGACCA GTTAGTTTTT
ATTAGTGATG AACAAAATAA TATTTTAGCT GTTTATCAAA AATATGAAAA TAATATTTTC
AAAGTTAAAA GAGGCGGATT AAATAATGAT ATATATTAA
 
Protein sequence
MQKSGIFILN KPKNISTYQL INQVKKKLNI KKVGHCGTLD LLATGVVICL VNNATKISDY 
LLNANKAYQV KIKLFTLTDS YDGEGNIIQT QIPFDISLDQ INKVISKYNN YSYEQYPPIY
SSIKVNGKKL YQYALANQDV EIKSRKVTIF KTKLLNYDQK NYEIFLDVKC SKGTYIRSLA
IDICKDLNTI GYVVELNRTL SGNFDINSAI DIKDLSWKHL TSIYDAVKIN DFKVVKYHNI
LDVKQGKKIV LNNIKDQLVF ISDEQNNILA VYQKYENNIF KVKRGGLNND IY