Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCAP_0326 |
Symbol | |
ID | 3829091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycoplasma capricolum subsp. capricolum ATCC 27343 |
Kingdom | Bacteria |
Replicon accession | NC_007633 |
Strand | + |
Start bp | 390352 |
End bp | 391230 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 4 |
GC content | 21% |
IMG OID | 637823484 |
Product | tRNA pseudouridine synthase B, putative |
Protein accession | YP_424311 |
Protein GI | 83319374 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.541699 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAAAT CAGGTATTTT TATTTTAAAT AAACCAAAAA ATATATCAAC TTATCAATTA ATTAATCAAG TTAAAAAAAA GTTAAATATC AAAAAAGTTG GTCATTGTGG TACTTTAGAT TTACTAGCAA CTGGAGTTGT TATTTGCTTA GTGAATAATG CTACTAAAAT TAGTGATTAT TTATTAAATG CTAATAAGGC TTATCAAGTA AAAATTAAAT TATTTACATT AACTGATAGT TATGATGGTG AAGGAAATAT AATTCAAACT CAAATTCCTT TTGATATTAG TTTAGATCAA ATAAATAAAG TAATTAGTAA ATATAATAAT TATTCTTATG AACAATACCC ACCAATTTAT TCATCTATAA AAGTTAATGG TAAAAAACTT TATCAATATG CTTTAGCTAA TCAAGATGTT GAAATAAAAA GTAGAAAAGT AACTATTTTT AAAACTAAAT TATTAAATTA TGATCAAAAA AACTATGAGA TTTTTTTAGA TGTTAAGTGT AGTAAAGGAA CTTATATTAG AAGTTTAGCT ATTGATATTT GTAAAGATTT AAACACAATT GGGTATGTAG TTGAACTTAA TAGAACCTTA TCTGGTAACT TTGATATAAA TAGTGCAATT GACATAAAAG ATTTAAGTTG AAAACATTTA ACTTCAATAT ATGATGCTGT TAAAATTAAT GATTTTAAAG TTGTTAAATA TCATAATATT TTAGATGTTA AACAAGGAAA AAAAATAGTT TTAAATAATA TTAAAGACCA GTTAGTTTTT ATTAGTGATG AACAAAATAA TATTTTAGCT GTTTATCAAA AATATGAAAA TAATATTTTC AAAGTTAAAA GAGGCGGATT AAATAATGAT ATATATTAA
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Protein sequence | MQKSGIFILN KPKNISTYQL INQVKKKLNI KKVGHCGTLD LLATGVVICL VNNATKISDY LLNANKAYQV KIKLFTLTDS YDGEGNIIQT QIPFDISLDQ INKVISKYNN YSYEQYPPIY SSIKVNGKKL YQYALANQDV EIKSRKVTIF KTKLLNYDQK NYEIFLDVKC SKGTYIRSLA IDICKDLNTI GYVVELNRTL SGNFDINSAI DIKDLSWKHL TSIYDAVKIN DFKVVKYHNI LDVKQGKKIV LNNIKDQLVF ISDEQNNILA VYQKYENNIF KVKRGGLNND IY
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