| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCAP_0237 |
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| Symbol | rpsD |
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| ID | 3828736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycoplasma capricolum subsp. capricolum ATCC 27343 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007633 |
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| Strand | - |
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| Start bp | 285801 |
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| End bp | 286427 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 4 |
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| GC content | 26% |
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| IMG OID | 637823396 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_424224 |
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| Protein GI | 83319988 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0862147 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAAGAT TTATAGGATC AACATTTAAA AAGTCTCGTA GATTTGGTTT TTCAATTCTT
GAAACTGGAA AAGAATTTAG CAAAGGTAAA AAAAGAATAA CAACACCAGG TCAACACGGT
AAAGAAAGAG CTAAAGTTAA AGTTTCTGAA TACGGTCAAC AATTACAAGA AAAACAAAAA
GTTAAATTTA TGTATGGACT AAGCGAAAGA CAATTTAGAA ATACTTTTGC AAAAGCTAAA
AAAATGCAAG GAATTTTAGG AACTAACTTT TTAGTTTTAC TAGAATCAAG ATTAGATAAT
ATTGTTTATA GATTAGGATT TAGTGCTACT AGACAAGGTG CTAGACAATT AGTAAACCAT
GGACATATTT TAGTAAATGG TAAAAAAGTA GATATTCCTT CATATTTATT AAGTGTTGGT
GATTTAGTTG AAGTTAAAGC ATCAATGAAA AAAAATGAAA AAGTTTTAGA AGCATTACAA
AACAATGAAG CAACTTTAGA ATTTGTTAAA GTTAATAAAA ATGAAGTTAA AGGTGAATTT
GTAAGACTTC CAGAAAGAAA TGAATTAAAT AGTGAAATTA GTGAATCACT AATCGTTGAA
TGATACAACC GTTTAATTAA AAAATAA
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| Protein sequence | MSRFIGSTFK KSRRFGFSIL ETGKEFSKGK KRITTPGQHG KERAKVKVSE YGQQLQEKQK
VKFMYGLSER QFRNTFAKAK KMQGILGTNF LVLLESRLDN IVYRLGFSAT RQGARQLVNH
GHILVNGKKV DIPSYLLSVG DLVEVKASMK KNEKVLEALQ NNEATLEFVK VNKNEVKGEF
VRLPERNELN SEISESLIVE WYNRLIKK
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