| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCAP_0228 |
|---|
| Symbol | pdhD |
|---|
| ID | 3829042 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycoplasma capricolum subsp. capricolum ATCC 27343 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007633 |
|---|
| Strand | + |
|---|
| Start bp | 275328 |
|---|
| End bp | 277217 |
|---|
| Gene Length | 1890 bp |
|---|
| Protein Length | 629 aa |
|---|
| Translation table | 4 |
|---|
| GC content | 31% |
|---|
| IMG OID | 637823387 |
|---|
| Product | dihydrolipoamide dehydrogenase |
|---|
| Protein accession | YP_424215 |
|---|
| Protein GI | 83319618 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAAAG TAAAATTTGC TGACATAGGT GAAGGTTTAA CAGAAGGAAC AGTCGCTGAA
GTTTTAGTTA AAGTTGGTGA TGTTGTTAAA GAAGGACAAC CTTTATACTT TGTTGAAACT
GATAAAGTAA ATAGTGAAAT TCCTTCTCCG GTTGCCGGAA AAATTGCAAT AATCAATATC
TCTACTGGTC AAGAAATTAA AGTTGGTGAT GTAGTTATTG AAATTGATGA TGGAAGTTCA
ACTTCTACAG CTTCAACTTC AAAAGTTGAA GTAGTTGAAG AAAATGCTAG TGTAGTTGGT
GCTACTCCAG TTTCGAATGA TGTTTTACCA AGTAGAGCAC CAAAGCCAAA AGCTGAAGCT
AAAGTTGAAG TAGTTGAAGA AAATGCTAGT GTAGTTGGTG CTACTCCAGT TTCAAATGAT
GTTTTACCAA GTAGAGCACC AAAGCCAAAA GTTGAAGCTC CAAAAGTTGA TGTTCAAATT
GAAGATACAT TTGATGTTTG TGTAGTTGGT GCAGGAATTG GTGGTTATGT TACTGCTATT
AAATCTGCAC AATTAGGATT AAAAACTTTA ATTATTGAAA AAGAATACTA TGGTGGAGTT
TGTTTAAATG TTGGATGTAT TCCTACAAAA ACTTTGTTAA AAACTTCTCA TGTTTATCAT
GATATAGTAC ATAAAGCAAA AGAATTAGGA ATCGTTTTAC AAAATACTGA AAATGTAGTA
ATTGATTGAG CTCAAGCACT TGAAAGAAAA AATGGTGTTG TTAAGAAATT AACAGGGGGA
GTTAAATATT TACTAGATAA AAATAAAGTA ACTCAAATTA AAGGTGAAGC TATTGCTTTA
GATAAAAATA CAATTTCAGT AAATAATAAA AATTATCGTG TTAATAATTT AGTTATTGCT
TCTGGATCAA CCCCAAATCA TTTACCACTT CCAGGTTTTG ATCAAGGAAG AAAAGATGGA
ATTATTATTG ACTCAACTGG AATTTTATCA GTTCCAAAAA TTCCTGAAAC TTTAGTTGTA
ATTGGTGGAG GAGTTATTGG TATTGAGTTT AGCTGTTTAT TTGCTAGTCT TGGTACAAAA
GTTACTGTTT TACAAGGATT ACCAACTATT TTAGAAATGC TAGATAAAGA TATTATTGAT
GCAATGACTA AAGAGTTAAA AAACAGATAC AATATCCAAG TTATTACAAA TGCTTCAGTT
AAAGAATTTA AAGATGGTTC TGTAGTATAT CAAATTGATG GTCAAGATCA AATGATTAAA
GGAGAATATG TTTTAGAATC AGTTGGACGT AAAACTTCAT TAACTGGATT TGAAAACATT
GGTTTAGAAT TAACTCCAAG AAAAGGTGTT GTTGTTAACG AGTATCAAGA AACTAACTTA
GATGGTGTTT ATGCAATTGG TGATGTTGTT GGAAAGTCAA TGTTAGCTCA AACTGCAGTT
AAAGGAGCTA TTGTTGCTGC TAATAGAATT GCTAAAAAAG CTAATAAGGC TCATGCTGAA
GATATTGTTA TGAATTATGA CAAAGTTCCA TCATGTATTT ATACACACCC AGAAGTTTCA
ATGATTGGTA AGACAGAACA ACAATTAAAA CAAGAAAATA TTGAATACAA AGCCTTTAAA
TTCCCATTTT CAGCAATTGG TAAGGCTTTA GCTGATGATG ATACTTCAGG ATTTGTAAAA
ATTATTGTAG AACCTAAATA CAAAACTATT TTAGGTGCAC ATATTATTGG AAATAGAGCT
ACTGAAATGA TTTCAGAAAT TACTGCTGTT ATTGAATGTG AAGGAACAAT CACAGAAATT
GCTAATACAA TTCACCCTCA CCCAACAATG AGCGAAGCAA TTGGAGAAGC AGCTGAAGCT
CTAGAAACAG GAAAAGCTAT TCATTTTTAA
|
|---|
| Protein sequence | MFKVKFADIG EGLTEGTVAE VLVKVGDVVK EGQPLYFVET DKVNSEIPSP VAGKIAIINI
STGQEIKVGD VVIEIDDGSS TSTASTSKVE VVEENASVVG ATPVSNDVLP SRAPKPKAEA
KVEVVEENAS VVGATPVSND VLPSRAPKPK VEAPKVDVQI EDTFDVCVVG AGIGGYVTAI
KSAQLGLKTL IIEKEYYGGV CLNVGCIPTK TLLKTSHVYH DIVHKAKELG IVLQNTENVV
IDWAQALERK NGVVKKLTGG VKYLLDKNKV TQIKGEAIAL DKNTISVNNK NYRVNNLVIA
SGSTPNHLPL PGFDQGRKDG IIIDSTGILS VPKIPETLVV IGGGVIGIEF SCLFASLGTK
VTVLQGLPTI LEMLDKDIID AMTKELKNRY NIQVITNASV KEFKDGSVVY QIDGQDQMIK
GEYVLESVGR KTSLTGFENI GLELTPRKGV VVNEYQETNL DGVYAIGDVV GKSMLAQTAV
KGAIVAANRI AKKANKAHAE DIVMNYDKVP SCIYTHPEVS MIGKTEQQLK QENIEYKAFK
FPFSAIGKAL ADDDTSGFVK IIVEPKYKTI LGAHIIGNRA TEMISEITAV IECEGTITEI
ANTIHPHPTM SEAIGEAAEA LETGKAIHF
|
|---|
| |