| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCAP_0209 |
|---|
| Symbol | |
|---|
| ID | 3828366 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycoplasma capricolum subsp. capricolum ATCC 27343 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007633 |
|---|
| Strand | + |
|---|
| Start bp | 251853 |
|---|
| End bp | 253139 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 4 |
|---|
| GC content | 20% |
|---|
| IMG OID | 637823368 |
|---|
| Product | rRNA methyltransferase RsmB (sun protein), putative |
|---|
| Protein accession | YP_424196 |
|---|
| Protein GI | 83319809 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
|---|
| TIGRFAM ID | [TIGR00446] NOL1/NOP2/sun family putative RNA methylase
[TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTGAACA AAAACATTAT AATAACGATG AATTCTAGAT CTATTGCTTT TGATATTTTA
AAAAAAGTTT TTGTTAATAA AGCTTATTCA AATGTTTTAT TAAATAAAAT TAGTAAAAAA
AATTTAAATC AGCAAGATAA AGATTTTGTA TTTAATTTAG TGCATGGAGT TATTAGTAAT
AAAATTCATT TAGATTATTT ATTAGCCAAA TTAATTGATG TTAAAAAAAC TTCAATTGAT
TTGCAAGTTA TTTTATTAAT TAGTTTATAT CAAATGATTT ATTTAAATAG TATTCCAAAT
TATGCTATTG TTAATGAAAG TGTAAATTTA ATAAAAACTA CTAGTCAAAA ACAAGCTAAT
TTTATTAATG CTATTTTGAA TAAGTTTTTA AGATTTAAAG ATAAATATTT AGAAATTAAT
TTAGATAATA AAGACTTGGA ATTATGCATA CTTCACTCTT TTTCTTATGA ACTTTATTTG
ATGCTAATTA AACAATATGA TAAAGAGATT GTTAATCAAA TAGTTGTTAA TAATCATCAA
ATACCAAAAC TATATATTAG AGTAAATACT TTAAAAATTA CATCTGATCA ACTTTTTAAT
AAATATAAAG ACATTTATTT ATTAGAAAAA ACTAATGTTA ATGACTGTTT AATTGCAAAT
AAAACAATTA TTAATTCTGA TTTGTATAAA AATGGTTTTA TAACTATTCA AGATAAAGCT
TCAATTTTAG TTAGTCAAAT TCTAAATCCA AGTTTAAATA CAAAAGTTTT AGATATGTGT
AGTGCACCTG GTGGTAAACT TACTCATTTA TCAATGATTT TAAAAAACAC TGGAAATATT
GTTGCAAATG AAATAAATGA ATCAAAAATT AAATTAATTA AAGAAAATAT TACTCGTTTA
AATTGTTTAA ATATTAGTGT AATTAATATG GATGCTAGAA AAATTAAACA AAGACAAGAG
TTTGATTATA TTTTATTAGA TGCTCCTTGT TCAGGGTTTG GAGTATTTAA AAGAAAGCCA
GAAATTAAAT TAAGATTTGA TCAAATTCAA GTAAATAGCA TTATTAATCT ACAAGAAGAA
TTATTAGAAT CAGCTTATTA TAATTTAAAA AACAATGGTG AAATGGTTTA TTCAACTTGT
ACAATTAATC AAGATGAAAA TCAAAATCAA ATTAACAAGT TTTTAAATAA GCATAAAGAT
ATGATTAAAC TTTATGAACA ACAAATTTTT GGTTTTGAAG AAAATACTGA TGGATTTTAT
ATTTGTAAAT TAAAAAAACA ACACTAG
|
|---|
| Protein sequence | MLNKNIIITM NSRSIAFDIL KKVFVNKAYS NVLLNKISKK NLNQQDKDFV FNLVHGVISN
KIHLDYLLAK LIDVKKTSID LQVILLISLY QMIYLNSIPN YAIVNESVNL IKTTSQKQAN
FINAILNKFL RFKDKYLEIN LDNKDLELCI LHSFSYELYL MLIKQYDKEI VNQIVVNNHQ
IPKLYIRVNT LKITSDQLFN KYKDIYLLEK TNVNDCLIAN KTIINSDLYK NGFITIQDKA
SILVSQILNP SLNTKVLDMC SAPGGKLTHL SMILKNTGNI VANEINESKI KLIKENITRL
NCLNISVINM DARKIKQRQE FDYILLDAPC SGFGVFKRKP EIKLRFDQIQ VNSIINLQEE
LLESAYYNLK NNGEMVYSTC TINQDENQNQ INKFLNKHKD MIKLYEQQIF GFEENTDGFY
ICKLKKQH
|
|---|
| |