Gene MCAP_0206 details

Gene Information

• Locus tag: MCAP_0206
• Symbol: def
• ID: 3829109
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Mycoplasma capricolum subsp. capricolum ATCC 27343
• Kingdom: Bacteria
• Replicon accession: NC_007633
• Strand: -
• Start bp: 249761
• End bp: 250363
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 4
• GC content: 24%
• IMG OID: 637823365
• Product: polypeptide deformylase
• Protein accession: YP_424193
• Protein GI: 83319871
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATAAAA GTTATTTGTT ACAAGATCAA ATTCCTTCAA ATAGTTGATT AGTTAAAGAT 
CATAAAAAAG AAATTATAAG AACAAAATCT ACTAAAATTA TTGACCCTAC AAATTTAAGT 
AATGATGAAG AATTAGTATT AAAAAAGCTA ATTGATTTTG TTACTTTTAG TCAAGATGAA 
AATAATAACA ATATAAATAA TAAAGACTAT TTGCGTCCAG CTGTTGGACT AGCAGCTCCA 
CAAATTGGTG TTAATAAAGA TATGTTTTAT GTAAGATTTC AACTTGATAA TAATAAAATA 
GAACAATATG CAATGATTAA TACAAAACTA ATTTCAACTT CAACTCAAAT TGCTTGTTTA 
AAAAATGGTG AGGGTTGTTT AAGTGTTGAT AATGATCATC TAGGTTTTGT ACCAAGACAT 
TATAAAATTG TTGTTCAAGG TTATGATTGA CTAACTAAAC AATATCTAAC TTTAACTTTA 
AGAAACTATC AAGCAATAGT TTTTCAACAT GAAATGGATC ATAACATTGG TATTCTTTAT 
TATGATCATA TTAATAAAAC TGACCCTTTA TATAAAGACA ATAGTTGAAT TATTATTGAA 
TAA 

 

Protein sequence

MDKSYLLQDQ IPSNSWLVKD HKKEIIRTKS TKIIDPTNLS NDEELVLKKL IDFVTFSQDE 
NNNNINNKDY LRPAVGLAAP QIGVNKDMFY VRFQLDNNKI EQYAMINTKL ISTSTQIACL 
KNGEGCLSVD NDHLGFVPRH YKIVVQGYDW LTKQYLTLTL RNYQAIVFQH EMDHNIGILY 
YDHINKTDPL YKDNSWIIIE