Gene MCAP_0144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCAP_0144 
SymbolprfA 
ID3828470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycoplasma capricolum subsp. capricolum ATCC 27343 
KingdomBacteria 
Replicon accessionNC_007633 
Strand
Start bp173248 
End bp174339 
Gene Length1092 bp 
Protein Length363 aa 
Translation table
GC content29% 
IMG OID637823307 
Productpeptide chain release factor 1 
Protein accessionYP_424135 
Protein GI83319336 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0216] Protein chain release factor A 
TIGRFAM ID[TIGR00019] peptide chain release factor 1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.372762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCTA AAACATATGA AGCATTAGAA ACAATGCAAA AAAGATTGTT TCAAATTCAA 
AAAGATTTAG AAGATGAAAA CATTTTAAAA GATATTAAAA AGTTTACTGA ACTAAACAAA
GAAAAAGCTA ATTTAGAAGA AGTTGTTGAA AAATTTGTTG AATATAAAAA AGCAGTTGAT
CATATAAAAG ATGCAAAAGC TATTTTAGAA AATGAAAAAG ATAGTGAACT TATTGAATTA
GCAAAAATTG AATTAGATGA AAATAATGAT AAAGTTGAAC ATTTACAACA AGTAATTGAA
GAAATGTTAT TACCAAAAGA TCCAAATGAT GAAAAAAACG TTATTATTGA AATCAGAGGT
GCTGCTGGTG GAGATGAAGC TAATATTTTT GCTGGTGATC TTTTAAGAAT GTATAAACTT
TATGCTGAAA CTCAAAATTG AAAAATAAAT ATTTTAGAAG CTTCTTTAGG TGAAGCTGGT
GGTTATAGTC AAGTTGTATT TATGATCAAA GGTGATAGAG TTTATTCTAA ATTAAAATTT
GAGTCAGGTG CTCATCGTGT TCAACGTGTT CCAAAAACTG AAGCTAAAGG AAGAATTCAA
ACTTCAACAG CAACTGTTGC AGTTTTACCT GAAATGAGTG AAGTTGAAAT TGAAATTAGA
TCAAATGATT TAAGAATTGA TACATATAGA GCTTCTGGAG CTGGTGGTCA ACATGTTAAC
ACTACTGATT CAGCAGTAAG AATTACACAT CTACCAACTG GAATTGTTGT AACTAGTCAA
GATGGAAGAT CTCAACATGA TAATAAAGAT ATAGCAATGA CAATGTTAAG AGCAAAAGTT
TATGAAGCTG AAGTTGAAAA ACAACAAGCT CAAGCTGATG CAACAAGAAA AAATGCAGTT
GGAACTGGTG CTAGATCTGA AAAAATTAGA ACATATAATT ACCCACAAAA TCGTGTTACT
GATCATAGAG TTGGTTTAAC TTTAAACAAA TTAGATCAAG TTATGGAAGG TAATATTGAT
GAATTTATTA TTGCTTTAAT TAATGAAGAA CAACGTCAAA AAGTAGCTGA ACAATTAAAA
AACAATGAAT AA
 
Protein sequence
MNAKTYEALE TMQKRLFQIQ KDLEDENILK DIKKFTELNK EKANLEEVVE KFVEYKKAVD 
HIKDAKAILE NEKDSELIEL AKIELDENND KVEHLQQVIE EMLLPKDPND EKNVIIEIRG
AAGGDEANIF AGDLLRMYKL YAETQNWKIN ILEASLGEAG GYSQVVFMIK GDRVYSKLKF
ESGAHRVQRV PKTEAKGRIQ TSTATVAVLP EMSEVEIEIR SNDLRIDTYR ASGAGGQHVN
TTDSAVRITH LPTGIVVTSQ DGRSQHDNKD IAMTMLRAKV YEAEVEKQQA QADATRKNAV
GTGARSEKIR TYNYPQNRVT DHRVGLTLNK LDQVMEGNID EFIIALINEE QRQKVAEQLK
NNE