| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCAP_0070 |
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| Symbol | rpoB |
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| ID | 3828896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycoplasma capricolum subsp. capricolum ATCC 27343 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007633 |
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| Strand | + |
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| Start bp | 81043 |
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| End bp | 84906 |
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| Gene Length | 3864 bp |
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| Protein Length | 1287 aa |
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| Translation table | 4 |
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| GC content | 28% |
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| IMG OID | 637823237 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_424065 |
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| Protein GI | 83319487 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTATA AAATTCGAAA AATCAATCGT AATGTAGAAC GTCGTGATTA TACTAAAGTA
TCAATGAATC TTTCTTTGCC AAATTTAATT GGTATTCAAA CTGAGACTTT TGAATGATTT
AAAACTAAAG GAATTCAAGA AGTTTTAGAT GAATTTTTTC CAATTTTATC ATTTGATGGA
TCTAGTGTTT TAACTTTAGA AAATTGAGGT TTTAAAGAAC CTAGATTATC TGTTAGACAA
GCAAGAGAAG AATCAAAAAT TTATGATGCT CCAATTTATG CAAATTTAAA ATTATCAGTT
AATAAAACTG AAGAAATCCA AAAAGAATTT GATGGTGTTG ATCAAGAAGA TACTTTAAAA
GTTTTAACTC ATTGATTAGA AGAAAAAACT GGTAATGGTA ATATAACATT TAAACAGCAA
TCACAAAATT CTTATTTTTT TGAAATAACT ATTAAAAAAT CTGAAAAACC AGATTTAATT
CAAATTGATA TTATTGAAGA TAAAAAAACT TCATTGATTT GTAATGTATC TATTTATAAA
TCAGGTGAAG TGTTTTTAGG TGATTTTCCA TTAATGACAG AAGCTGGAAC TTTTATTATT
AATGGTTCTC AAAAAGTCAT TGTATCTCAA TTAGTAAGAT CTCCAGGAGC TTATTTTAAT
AAAGAATTAA ATCGTAAAAC TGGAGAAATG ATTTATTTTG CAGACATTAT TCCAAGCAGA
GGAACTTGAT TAGAATATGA AACTGATTCT AAAAAAATCG GAAGCGATGC AATCAATCCT
TTATACGTAA AAATTGATAA ATCAAGAAAA ACTACAGCTA CTTCTTTATT ATTAGCTTTT
GGTATTAGTA AAGATGATAT TTTAAATATT TTTGATAATG ATGAAGTACT AGTTGAAACT
CTACAACAAG ATTCAATTAT TGGAGATTTT AAAATAGATT GATCAAATCA AGTTCAAGAA
ATTTATAAAA AAATTAGACA AGGTGAAACT GCAACTAGTG AAGGTGCTTC TAAATTTATT
AATAGTATTT TATTTGATAA AAGAAAATAT GATTTAACTA AAGCTGGAAG ATTTAAATTA
AAGCAAAAAC TTTCTATTAA AAATAGAATT TTAAATAAAG TTATAGCTGA AGATATTCTT
GATGCTAATA ATAATGTGTT AATAGCTAAA GATACTGAAG TTACTAAAAA TAATATTCAA
GAAATTTCTA AAATTTTAGA TCAAGATGTA ATGAGTATTG ATTTAAAATA TCTATCTGAT
ATTCCAGGAA ATAGAAAAGT TCAAAAAATT AGAGTTTATA AAGATAGTGA ACTAAAAACC
GATACTACTT GTTTAATTGG TTTAACTAAT TCATCTAATG AAGAATTCAT AACAGTGGCT
GATATTTTAT CAACTGTTTC TTATTTATTA AACTTAAAAT ATAACATTGG TGAAATTGAT
GATATTGATA ACTTAGGAAA CAGAAGAGTT AGAACTGTTG GTGAATTATT ACAAAATCAA
TTTAGAATGG GATTAAACCG TATTGATAAA AATGTTAAAG AAAAATTAGC TACAAGTGAT
TTGTATAAAG TTAAAACTTC AACAATTATT AATGCAAAAC CTTTAACTGC AATTATTGGT
GAGTTTTTCA ATTTATCACA ATTATCTCAA TTTATGGATC AAATTAACCC ATTATCAGAA
TTAACTAATA AACGTAGATT AACAGCTTTA GGACCTGGTG GTTTATCAAG AGATAGAGCA
GGATTAGAAG TGCGTGACGT TCACCCATCT CATTATGGAA GAATTTGTCC TATTGAAACA
CCAGAAGGAC CAAACATTGG ATTAATTAAT AACTTGTCAA CTTATGCAAG AGTTAATGAA
TATGGATTTA TTACAACTCC ATATAGAAAA GTTATTAATG GAATTATTCA AAACGATCAA
GTTGAATATT TAACAGCCGA TCAAGAAAAA AACTTTATTA TCGCTCAATC TAATGTTAAT
CAAGATGAAA ATGGAAAAAT TTTAGATGAA ATTATAGTTT CACGTTTTAA TGGTGATGAC
TATATGGCTA AAGTTGAAGA AATTCATTAT ATTGATGTTT CTCCAAAACA AATTGTTTCA
GTTGCTACAA GTGGTATTCC ATTTTTAGAA AATGATGATG CTAACCGTGC TTTAATGGGT
GCTAACATGC AACGTCAAGC AGTACCTTTA ATTAAGCCAG AATCACCAAT TGTTGCAACT
GGTATTGAAT TTGAAGCAGC ACGTGATTCA GGTGAGGCTA TTGTTGCAAA AGAAGATGCA
ATTGTTAAAT ATGTTGATTC AAAAACCATA ATTACTGATG GAGAATCTGG AATTAGAACT
TATATCTTAT CAGATTATGA AAGATCAAAT AATGGAACTT CATTAACTCA ATCACCAATT
GTTAAAGTTG GAGATGTTGT TAAAAAAGGT GAAATTATTG CTGATGGTCC ATCAATGGAT
CAAGGTGAAT TAGCAATTGG TCAAAACGTG GTTGTTGCTT TTTCAACTTA TAATGGATAC
AACTTTGAAG ATGCTATTGT TATGAGCGAA AGAATTGTTA TAGATGATCG CTTTACTTCA
ATTCATATTG ATGAATATAC TTTAGAAGTA AGAAATACAA AACAAGGGCA AGAAGAAGTA
ACTAGAGAAA TTCCTAATAT GTCAGAACAA GCTAAAAGAC ATTTAGATGC TGAAGGAATT
GTAGCTATTG GTACTGAAGT TAAAGTTGGA GATGTTTTAG TTGGAAAAGT AACTCCAAAA
GGACAAGTTC AACTTTCTCC AGAAGATAAA TTATTACATG CTATTTTTGG TGAAAAATCT
AGAAATGTTA AAGATAATTC ATTAAGAGTT CCAAATGGTG GAGAAGGAAT TGTTCAATCA
ATTAAACGTT TTAAAGCAAA AAGCGCATTA AATCCTGATG GAATTGAATT ACCAGCTGAC
ATTATAGAAG TAATTAAAGT TTATGTTGTT CAAAAACGTA AAATTCAAGA AGGAGATAAA
ATGTCTGGTC GACATGGAAA CAAAGGTATT ATTTCAAGAA TTTTACCTAT TGAAGACATG
CCGCATTTAG AAGATGGAAC ACCAGTTGAT ATTATCTTAA ACCCACAAGG GGTTCCTTCA
CGTATGAACA TTGGACAAAT TTTAGAAATC CATTTAGGAA TGGCTGCTAA AAAACTAAAT
CAAAAAGTTA TTACTCCTGT TTTTGAAGGA TTAAATGAAA AAGAATTAGA AGAAATAATG
GCTGAAGCTG GAATGACAAA TTATGGTAAA GTTACTTTAA TTGATGGTCA AACTGGTGAA
CCATTTGATA AACCAATTGC TGTTGGAGTT ATGTACATGT TAAAACTATC TCACATGGTT
GATGATAAAA TTCATGCACG TAATGTTGGT CCTTATTCAT TAATTACTCA ACAACCATTA
GGAGGAAAAG CTCAAAATGG TGGTCAACGT TTTGGAGAAA TGGAAGTATG AGCTTTAGAA
GCTTATGGAG CTGCTCATAC ATTACGTGAA ATTCTAACAA TTAAATCAGA TGATATTAAA
GGTCGTTCAA AAACTTATGA AGCAATTGTT AGATCAAAAA GAATTCCTGA ACCTGGAATT
CCAGAATCAT TTAATGTTTT ATCAAAAGAA ATTATGGGAT TAGGATTTAA TATGTATATG
ATTGATGAAA CTGGCGAAAA ATCAGCAATT AATGCATATG ATAAAAAGGA CTTTGAAATT
GATAATTATG ATGATGAAAT TCTAATCAAA ACTGATAATT TATACATTGA TGATCAAGAT
GTTGATGCTG AATTTGAAGA TTTAACTTAT GTTGATGAAA ATGATATTTT AAACTCATTT
GAACTAGATA ATGAAGAAGA ATAA
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| Protein sequence | MAYKIRKINR NVERRDYTKV SMNLSLPNLI GIQTETFEWF KTKGIQEVLD EFFPILSFDG
SSVLTLENWG FKEPRLSVRQ AREESKIYDA PIYANLKLSV NKTEEIQKEF DGVDQEDTLK
VLTHWLEEKT GNGNITFKQQ SQNSYFFEIT IKKSEKPDLI QIDIIEDKKT SLICNVSIYK
SGEVFLGDFP LMTEAGTFII NGSQKVIVSQ LVRSPGAYFN KELNRKTGEM IYFADIIPSR
GTWLEYETDS KKIGSDAINP LYVKIDKSRK TTATSLLLAF GISKDDILNI FDNDEVLVET
LQQDSIIGDF KIDWSNQVQE IYKKIRQGET ATSEGASKFI NSILFDKRKY DLTKAGRFKL
KQKLSIKNRI LNKVIAEDIL DANNNVLIAK DTEVTKNNIQ EISKILDQDV MSIDLKYLSD
IPGNRKVQKI RVYKDSELKT DTTCLIGLTN SSNEEFITVA DILSTVSYLL NLKYNIGEID
DIDNLGNRRV RTVGELLQNQ FRMGLNRIDK NVKEKLATSD LYKVKTSTII NAKPLTAIIG
EFFNLSQLSQ FMDQINPLSE LTNKRRLTAL GPGGLSRDRA GLEVRDVHPS HYGRICPIET
PEGPNIGLIN NLSTYARVNE YGFITTPYRK VINGIIQNDQ VEYLTADQEK NFIIAQSNVN
QDENGKILDE IIVSRFNGDD YMAKVEEIHY IDVSPKQIVS VATSGIPFLE NDDANRALMG
ANMQRQAVPL IKPESPIVAT GIEFEAARDS GEAIVAKEDA IVKYVDSKTI ITDGESGIRT
YILSDYERSN NGTSLTQSPI VKVGDVVKKG EIIADGPSMD QGELAIGQNV VVAFSTYNGY
NFEDAIVMSE RIVIDDRFTS IHIDEYTLEV RNTKQGQEEV TREIPNMSEQ AKRHLDAEGI
VAIGTEVKVG DVLVGKVTPK GQVQLSPEDK LLHAIFGEKS RNVKDNSLRV PNGGEGIVQS
IKRFKAKSAL NPDGIELPAD IIEVIKVYVV QKRKIQEGDK MSGRHGNKGI ISRILPIEDM
PHLEDGTPVD IILNPQGVPS RMNIGQILEI HLGMAAKKLN QKVITPVFEG LNEKELEEIM
AEAGMTNYGK VTLIDGQTGE PFDKPIAVGV MYMLKLSHMV DDKIHARNVG PYSLITQQPL
GGKAQNGGQR FGEMEVWALE AYGAAHTLRE ILTIKSDDIK GRSKTYEAIV RSKRIPEPGI
PESFNVLSKE IMGLGFNMYM IDETGEKSAI NAYDKKDFEI DNYDDEILIK TDNLYIDDQD
VDAEFEDLTY VDENDILNSF ELDNEEE
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