| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCAP_0066 |
|---|
| Symbol | rplA |
|---|
| ID | 3828286 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycoplasma capricolum subsp. capricolum ATCC 27343 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007633 |
|---|
| Strand | + |
|---|
| Start bp | 77860 |
|---|
| End bp | 78540 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 4 |
|---|
| GC content | 29% |
|---|
| IMG OID | 637823233 |
|---|
| Product | 50S ribosomal protein L1 |
|---|
| Protein accession | YP_424061 |
|---|
| Protein GI | 83319637 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0081] Ribosomal protein L1 |
|---|
| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAA TCAGTAAAAG ATTCAAAGAA GCTTTAAGTA AAGTTGAAAA AAATAAAGTT
TATCCATTAA ATAAAGCTTT AGATCTAGCA AAACAAACTG CTACAACTAA ATTTGACTCA
ACAGTTGAAG TTGCATTTAA TTTAAATATT GACCCAAGAA AAGCTGATCA ACAAATTCGT
GGTGCTGTAG TTTTACCTGC AGGAACTGGA AAAACTCAAA GAGTTTTAGT TTTAACTAAT
ACTAAAACTA AAGAAGCTGA GCAAGCAAAA GCTGATATTG TTGGTGGAGA AGAACTAATC
AACAGAATTA AAAATGAAAA TTGATTTGAT TTTGATATTA TTGTTGCTAC TCCAGAAATG
ATGGCAAAAT TAGGAGCAAT TGGTAAAATT TTAGGTCCTA AAGGATTGAT GCCAAATCCA
AAAACTGGAA CTGTAACTAT GGATGTTGCT AAAGCAGTTG ATGATATTAA AAAGGGAAAA
GTTGAATATC GTGCTGATAA AGAAGGAAAT ATTCATTTAA TTATTGGTAA AGTTTCATTT
GAAGCTGAAA AATTAGAAGA AAATTTCAAA GCTGTTATTG ATGAAATTAG AAGAGTTAAA
CCTCAAACTG TAAAAGGTGA TTACATCAAA AATATAACTT TATCAACAAC AATGGGTCCT
GGTATCAAAG TTGAATTTTA A
|
|---|
| Protein sequence | MAKISKRFKE ALSKVEKNKV YPLNKALDLA KQTATTKFDS TVEVAFNLNI DPRKADQQIR
GAVVLPAGTG KTQRVLVLTN TKTKEAEQAK ADIVGGEELI NRIKNENWFD FDIIVATPEM
MAKLGAIGKI LGPKGLMPNP KTGTVTMDVA KAVDDIKKGK VEYRADKEGN IHLIIGKVSF
EAEKLEENFK AVIDEIRRVK PQTVKGDYIK NITLSTTMGP GIKVEF
|
|---|
| |