Gene MCAP_0055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCAP_0055 
Symbol 
ID3828753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycoplasma capricolum subsp. capricolum ATCC 27343 
KingdomBacteria 
Replicon accessionNC_007633 
Strand
Start bp68672 
End bp69481 
Gene Length810 bp 
Protein Length269 aa 
Translation table
GC content22% 
IMG OID637823222 
Producthemolysin A 
Protein accessionYP_424051 
Protein GI83319276 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTAA GGTTAGATGA ATATATCTAT AAAATCAATT TAACACAATC AAGAAGTAAA 
GCAAAAGAAC ATATTACTAA TAAAAAAGAT GTTTATGTTA ATAATATAAA CATTATAAAA
CCTAGTTTTT TAGTTGATAA TAATGATGTT ATTGAAATTA GATCAACAAA ATTAAAATAT
GTCTCAAGAG CTTATGAAAA ACTAGAAAAA GCTATAAATA AATGAAATAT TGATCTGACT
AATAAAGTTT GTCTAGATAT TGGAGCTTCA ACTGGTGGGT TTACTCAATG TTGTTTAGAT
AATAATGCTA AATTAGTTTA TGCTGTTGAT GTCGGAACAG ATCAATTACA CTCATCACTT
TTAAATAATT TAAAAGTTAT TAATATGAGT CAGTGTAATT TTAGAAATGC TAAAAAACAA
GACTTTTTAA AAAATATTGA TTTTGTTTGT TGTGATGTAA GTTTTATTTC TTTAGAAAAG
ATTTTTTTAC CTTTAAAAGA TATTGTTGAA TTTAATACAA GCGGGGTGTT TTTAATAAAA
CCTCAATTTG AATTACAACC TAAAAACATT AAAAATGGAA GAATTAATTC TAAATTAGAT
CATAAGCAAG CAATTTTAAA AGTAATTAAT TATGCAAATA GCAATAGTTT TGATGTAATT
AATTTAGATT ATTCACCAAT TTTAGGAAAC AAAAAACAAA ACATTGAATA TCTAGCTTAT
ATTATTAAAA AAGAAAATAA TTATAAAATT TGAAAAGAAG AAGAAATAGA TCAACTAGTA
AATATAGCTT GAAAAGAATT AAAAAAATAG
 
Protein sequence
MKLRLDEYIY KINLTQSRSK AKEHITNKKD VYVNNINIIK PSFLVDNNDV IEIRSTKLKY 
VSRAYEKLEK AINKWNIDLT NKVCLDIGAS TGGFTQCCLD NNAKLVYAVD VGTDQLHSSL
LNNLKVINMS QCNFRNAKKQ DFLKNIDFVC CDVSFISLEK IFLPLKDIVE FNTSGVFLIK
PQFELQPKNI KNGRINSKLD HKQAILKVIN YANSNSFDVI NLDYSPILGN KKQNIEYLAY
IIKKENNYKI WKEEEIDQLV NIAWKELKK