Gene MCAP_0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCAP_0008 
SymboldnaX 
ID3828328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycoplasma capricolum subsp. capricolum ATCC 27343 
KingdomBacteria 
Replicon accessionNC_007633 
Strand
Start bp5851 
End bp7860 
Gene Length2010 bp 
Protein Length669 aa 
Translation table
GC content21% 
IMG OID637823178 
ProductDNA polymerase III gamma-tau subunits 
Protein accessionYP_424007 
Protein GI83320030 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.167579 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACAA ATAAACAATC TTTATATAGA GCTTATAGAC CAAAAGATTT TAATAGTGTT 
GCTGGACATA ATAGTATAAA AGAAATTTTA GAAAAACAAA TTAAAGATAA TAGAATTAAT
CATGCTTTAT TGTTTTCTGG TCAAAGAGGA ACTGGAAAAA CAAGTGTTGC TAGAATCTTT
GCAAAAACTG TTAACTGTTT AAATTTAACT GGTTCAAAAG CTTGTGAACA GTGCAATAAT
TGCAAACTAG CAAATGAAAA TCAATTAATT GATATTATTG AAATTGATGC TGCTTCAAAT
AATGGTGTTG ATGAAATTAG AGAAATTAAA AATTCGGTTT CAACTTTACC AATAAATAGT
AAATATAAAG TTTATATTAT TGATGAAGTT CATATGTTAA CAAAACAGGC TTTTAATGCT
TTATTAAAAA CTTTAGAAGA ACCTCCAGTT TATACAATTT TTATTTTAGC AACTACTGAA
TTTAATAAAA TCCCTCAAAC TATTCTATCT AGATGTCAGA TTTTTAATTT TACAAAAATT
GATAAAAATT CTTTGAAGAA TCGCTTACAA TACATAGTAA ATCAAGAAAA TTATCAAATC
GAAAAAGAAG TTTTAGATGA AATATTTTAT CTTTCAGAAG GTTCTTTAAG AGATGCAATT
AATATTTTAG AACAATTAAT GTTAGCTACA GATGATTTAA TTACTATAAA AAATTTAAAG
TCAATTTTTT TAATTGCAAC AAAACAAGAA CAATTACAAG TAATTCATCA GTCATTAAAT
AACAATACTA ATTTTATAAT TTCTTATTTT CAAAAAGCAA ATGACCAGGG AATGAATTGA
GATGTTTTTG CTTTAGGTTT AATTGAAATT TTAAAAGAAA TTATTGAATA TAAACTAACT
AATAATATTG AATTTTTAAA TATATTAGAA GAAGATGAAG CTAAGCAATT TATTAATATT
GATGTTAATC ATCTTTTTTT ACTATCAGAT AATTTAGCTG AAGCTTATTT TAAAACAAAA
GCTGCAAATA TTAGTTTTAA CTACTTATTA TTAAGTTTGT TAAAAACTAT TAATTCAAAT
AATAAACAAG AAAATATACA AACAATTAAT CAAAATATAA ATAATGTAGA ATCTATTGAT
TTATTAGAAC AACAAGATGT TATAAAACAA AATTATGTTC AAGAATTTAT TACTAATAAT
GAAATAACAG ATCAATCTGT TGATGAAATT TTTATTAGAC CAAATATTAA AAATCAAACA
ATAGATCAAC AAGAAGTTGA ATTAGTAAAA AAAGAAGAAA TTTTTACTAA CCAAATTCAA
CAAGAAAATA ATTTTGACGA ATTAGTAATA GATGAACCAA TGAATAATTC TAATGAACAA
GATATTGATG TAAAATTTGT AAATAATAAT CAAGAATTAG AATTAACTAG TGAATTTTAT
AAAACTTTTA GTGAGTTGAA ATCTAAGTTT AATGTTTGTG TTTCTAATTC TATAGATAGT
AAAGTTAAGA TGCTTTCAAA TGATGATTTA ATTAGCATCT TTATTCAAAC TAAAAACTAT
AAAGATGATA AAAAGATTTT AGAAAATTTA TTTGAAGAAC TTTTTAAAGA ACAAGATGAT
ATTTTAATTA ACCCTGTTCA AGCAACTAAT TTATTTATGT TAATAGATAG TAAAATTATT
TCTTTTACTA ATGAAGTAAT TGTTGTAAAA ACTCAAACTA AAACTCAATC TAATTTAATT
AATGATTCAA TGTTAGATAA TCATGTTTTA CAAGCAATTT ATCAATGATT TAAAAAGCCT
TATATAATTT TTGCTATTGA TAAAATGAAA TGAGATGAAA TTAAAACTAT CTTTATTGAT
TTAAAAAATA AAAATAAATT ATCAGAATAT AACATAATTG ATCAAAAACA ATTAAAAGAA
AAATACTTAA CAATTAATAA TAAACTTGAT GAAGATTTAA TTAACAAAGC AAAAGATCTT
TTCAATGATG ATTTTATGAT AGGTGATTAA
 
Protein sequence
MNTNKQSLYR AYRPKDFNSV AGHNSIKEIL EKQIKDNRIN HALLFSGQRG TGKTSVARIF 
AKTVNCLNLT GSKACEQCNN CKLANENQLI DIIEIDAASN NGVDEIREIK NSVSTLPINS
KYKVYIIDEV HMLTKQAFNA LLKTLEEPPV YTIFILATTE FNKIPQTILS RCQIFNFTKI
DKNSLKNRLQ YIVNQENYQI EKEVLDEIFY LSEGSLRDAI NILEQLMLAT DDLITIKNLK
SIFLIATKQE QLQVIHQSLN NNTNFIISYF QKANDQGMNW DVFALGLIEI LKEIIEYKLT
NNIEFLNILE EDEAKQFINI DVNHLFLLSD NLAEAYFKTK AANISFNYLL LSLLKTINSN
NKQENIQTIN QNINNVESID LLEQQDVIKQ NYVQEFITNN EITDQSVDEI FIRPNIKNQT
IDQQEVELVK KEEIFTNQIQ QENNFDELVI DEPMNNSNEQ DIDVKFVNNN QELELTSEFY
KTFSELKSKF NVCVSNSIDS KVKMLSNDDL ISIFIQTKNY KDDKKILENL FEELFKEQDD
ILINPVQATN LFMLIDSKII SFTNEVIVVK TQTKTQSNLI NDSMLDNHVL QAIYQWFKKP
YIIFAIDKMK WDEIKTIFID LKNKNKLSEY NIIDQKQLKE KYLTINNKLD EDLINKAKDL
FNDDFMIGD