| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCAP_0004 |
|---|
| Symbol | ksgA |
|---|
| ID | 3828432 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycoplasma capricolum subsp. capricolum ATCC 27343 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007633 |
|---|
| Strand | + |
|---|
| Start bp | 3214 |
|---|
| End bp | 4014 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 4 |
|---|
| GC content | 19% |
|---|
| IMG OID | 637823175 |
|---|
| Product | dimethyladenosine transferase |
|---|
| Protein accession | YP_424004 |
|---|
| Protein GI | 83319298 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
|---|
| TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.50922 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCTA AAAAATATTA TGGACAAAAC TTTATTTCTG ATTTAAATTT AATCAATAAA
ATTGTTGATG TTTTAGATCA AAATAAAGAT CAATTAATTA TTGAAATTGG TCCAGGAAAA
GGTGCTTTAA CTAAAGAGTT AGTTAAAAGA TTTGATAAAG TTGTAGTTAT TGAAATTGAT
CAAGATATGG TTGAAATTTT AAAAACCAAA TTTAATCATT CAAATTTAGA AATTATTCAA
GCTGATGTTT TAGAAATTGA TTTAAAACAA CTAATAAGTA AGTATGATTA TAAAAATATA
AGTATTATTT CAAATACACC TTATTATATA ACTAGTGAAA TTTTATTTAA GACTTTACAA
ATTAGTGATT TACTTACAAA AGCTGTTTTT ATGTTGCAAA AAGAAGTTGC TTTAAGAATT
TGTAGTAATA AAAATGAAAA TAATTATAAC AACCTTTCTA TTGCATGTCA GTTTTATAGT
CAAAGAAACT TTGAGTTTGT AGTTAATAAG AAAATGTTTT ATCCAATTCC TAAAGTTGAT
TCAGCAATTA TTAGTTTAAC TTTTAATAAT ATTTATAAAA AACAAATTAA TGATGATAAA
AAATTTATCG AATTTGTTAG AACACTTTTT AATAATAAAA GAAAAACTAT TTTAAATAAT
TTGAATAATA TTATTCAAAA CAAAAATAAA GCATTAGAAT ATTTAAAGAT GTTAAATATT
AGTAGCAATT TAAGACCAGA ACAACTAGAT ATAGATGAAT ATATAAAATT ATTTAACCTA
ATCTATATTA GTAATTTTTA A
|
|---|
| Protein sequence | MKAKKYYGQN FISDLNLINK IVDVLDQNKD QLIIEIGPGK GALTKELVKR FDKVVVIEID
QDMVEILKTK FNHSNLEIIQ ADVLEIDLKQ LISKYDYKNI SIISNTPYYI TSEILFKTLQ
ISDLLTKAVF MLQKEVALRI CSNKNENNYN NLSIACQFYS QRNFEFVVNK KMFYPIPKVD
SAIISLTFNN IYKKQINDDK KFIEFVRTLF NNKRKTILNN LNNIIQNKNK ALEYLKMLNI
SSNLRPEQLD IDEYIKLFNL IYISNF
|
|---|
| |