Gene NmulC_2793 details

Gene Information

• Locus tag: NmulC_2793
• ID: 3786793
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosospira multiformis ATCC 25196
• Kingdom: Bacteria
• Replicon accession: NC_007616
• Strand: +
• Start bp: 13678
• End bp: 15663
• Gene Length: 1986 bp
• Protein Length: 661 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 637812902
• Product: TRAG protein
• Protein accession: YP_413489
• Protein GI: 82703925
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG3505] Type IV secretory pathway, VirD4 components

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.0977234
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGGTAACG ACATTCTGGC TTTGGGAGAA AGCCAGCCAA AATACAATCG CCGAGCATTG 
GCCTCGGCCC AATTTATTCC CCAGGAATAT CTAGACCGAC AGGGATACCG CAAAGGCGAT 
TTCTGGCTTG GCCGAACCCT CAACGGACGG CCTTTCGGTT GGAACGAGGA AATGAATCTG 
CTGACCTGTG CGGGACCAGG GGCAGGGAAG GGCGTTTCGA CAGTCGTACC GAACCTGCTG 
GAATTTCCTG GGAGCGCAGT GGTAGTGGAT CCAAAGGGAG AGCTGGCCAG CATGACTGCC 
GCTTTCCGTC GCGACGTGCT TGGACAGAAG GTCATCGTCC TGGATCCTGC GCGAACTGCT 
AAGGTAAGCG AGGATCTGCG CGGCACTTAC AACCCTTTCG ACGAACTGGA TGCGGACGAT 
CCCTTTGTTA CGACCGCCGC CCAGGTTATT GCCTCCGGGA TCGTCGTTCC CAATCCCAAG 
GCAAAAGAAC CGTTCTGGGA CGACAACGCT CTCGATTTCA TTCAGTCGTG CATCCTCTAT 
ATGGTGCGGC ATTATCCGCC TAATTTACGC ACCCTTATGA AGCTGCGGGA GACGGTTTCT 
ATGGGGGACA GCGACCTCTT CGATGCATAT GTACGGCGCA AACAAGAAGA GGATCCAGAT 
TTTATGGGAT CCGAAAGTGA TGCCTTCGGG CTGTTCCTGA AAGAAATGTT TAACACCCCG 
GACTTTGGCG GCGTGATACG TGAGACTGCC GCCAAAATCG GGCGAATGGG CGAAAACACG 
AAAGGCAGTG TACTTTCTAC AGCGGCCACA CATCTGGACT TCGTAAAATC CCCGGAACTT 
TGGGACGTGC TGCAATCGAA CCCGGACCCG TCTCGAACCT TCCGGCTGCG GGAGCTGAGA 
CGTAATGACC GGCCCCTCAC GGTCTATCTA TGCCTTCCTG TAGACATGAT CCCGCGTCAA 
GGAAGATGGT TTCGGATGAT CATATCCCGC ATCATCCAAT CCATCGAACG CAGCGAATTC 
GATAAAAAAC GAGATCACCC TGTTTTGATG ATGATCGACG AGTTTTTTCA GCTCGGTCCG 
ATTCCTTCTA TTACTAACAC CCTCACATAT TCACGAAGCT TTGGGCTGCG GCTGTGGCTA 
ATTGTGCAAG ATTTGAATCA GCTTAAAACC AATTACCCGG ACGCCTGGGA AACCATTCTC 
GGTTCCTGCG GAATAAAGCA GTTTTTCGGA GTAAACGATC TCGTTACCGC TAAATATGTT 
TCGGAATTGA TTGGGGAAGA AGAGATAGAT ATACCCTCGA TCTCGCTTAC CAAAACCTCT 
TCCGGGACGG AGAGCAGAAA CTCCTCGCAA ACGCACAGCC AAGGGATGAC CAGTACCGCC 
GGAAATAACT GGTCAAGCAG TACAGGAAGG TCTGTATCCT TTTCGCGCAC GAATAGCACA 
AACCATAACA TTACGACCGG GCGCGGGATT TCCAATAATC AGGCTGCCAG CAGCGGGGTA 
AGCGAAAGTT GGGGAAGCGG TGCCAATAAC GGGGAAACTA TTACAAATAG TCAACAAACT 
TCCCAGAACT CGGGACGCTC TGCGCACGCA ACTACGGGAC AAAATTACGG CGTTAGCAGC 
TCCCTTGGCC AGTCCTCCTC CCTATCTGGC TCGGCAGGCC AAAGCGCCTC TTCTGGCATG 
ACGTTTGGCT CAAGTATCTC GGACACCCGG GGCGGATCCA TCTCGACATC AGAAAGCCGA 
AATATCTCCA ACACGGCGGG AGAAGGTTCC TCTGTTTCAA CCGGGATAAA TTACGCTTTT 
TCTGTTTCCA AACAGAAAAG ACGGCTCCTG CGCCCCGAAG ATGTTCTGGT GAGCTTCACC 
AAAAAGAACC TGGTGCAACT TACGCATATT CGAGATCAGG GGGGCATGAT GCTATTCCGT 
ACCCCATTCT ATGCCGATCC GTATTTCCGA TTCCTTCTGA CGGAAAAAAC AAAAAATGAC 
ACATAA 

 

Protein sequence

MGNDILALGE SQPKYNRRAL ASAQFIPQEY LDRQGYRKGD FWLGRTLNGR PFGWNEEMNL 
LTCAGPGAGK GVSTVVPNLL EFPGSAVVVD PKGELASMTA AFRRDVLGQK VIVLDPARTA 
KVSEDLRGTY NPFDELDADD PFVTTAAQVI ASGIVVPNPK AKEPFWDDNA LDFIQSCILY 
MVRHYPPNLR TLMKLRETVS MGDSDLFDAY VRRKQEEDPD FMGSESDAFG LFLKEMFNTP 
DFGGVIRETA AKIGRMGENT KGSVLSTAAT HLDFVKSPEL WDVLQSNPDP SRTFRLRELR 
RNDRPLTVYL CLPVDMIPRQ GRWFRMIISR IIQSIERSEF DKKRDHPVLM MIDEFFQLGP 
IPSITNTLTY SRSFGLRLWL IVQDLNQLKT NYPDAWETIL GSCGIKQFFG VNDLVTAKYV 
SELIGEEEID IPSISLTKTS SGTESRNSSQ THSQGMTSTA GNNWSSSTGR SVSFSRTNST 
NHNITTGRGI SNNQAASSGV SESWGSGANN GETITNSQQT SQNSGRSAHA TTGQNYGVSS 
SLGQSSSLSG SAGQSASSGM TFGSSISDTR GGSISTSESR NISNTAGEGS SVSTGINYAF 
SVSKQKRRLL RPEDVLVSFT KKNLVQLTHI RDQGGMMLFR TPFYADPYFR FLLTEKTKND 
T