| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A2671 |
|---|
| Symbol | |
|---|
| ID | 3785678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosospira multiformis ATCC 25196 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007614 |
|---|
| Strand | - |
|---|
| Start bp | 3067053 |
|---|
| End bp | 3068402 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637812761 |
|---|
| Product | two component, sigma54 specific, Fis family transcriptional regulator |
|---|
| Protein accession | YP_413350 |
|---|
| Protein GI | 82703784 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | [TIGR02915] putative PEP-CTERM system response regulator |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAGG ACAAGAAGAG TCTGTTGGTA ATCGAGGATG ATCCCGGATT GCAACGCCAA
TTGCGCTGGA GCTTCGATAC TTATGAAGTG TTGGTGGCAA GCGACCGCGA AAGCGCGCTT
GCTCTGGTCA GACGGCATGA GCCCGCCGTC GTCACCATGG ATCTGGGTCT TCCTCCCGAT
GCGGATGGCG CTTCCGAAGG TTTGGCTACG TTGGAACAGA TACTTGAACT GGTGCCGGAT
ACGAAGGTAA TTGTTCTCAC CGGGAATCAG GACCATGGAA ATGCTCTCAA GGCTATCGCT
GCAGGGGCTT ATGACTTTCA TCAGAAGCCC TTTGATCCCA ATATCCTGAG CCTGGTGATA
GAACGGGCAT ACTATCTCTA TGCTCTGCAG CAGGAGAATC GCAAGCTGTT GCAGGCCCAG
ATGAACTCTC CCATCAACGG CCTCATAACC CGCGATCCCG TCTTGAGCAA GGTATGCCGC
AACGTGGAAA AAGTCGCACC CTCGGACGCT ACGGTTATAC TGCTGGGCGA GAGTGGTACC
GGCAAGGAAA TTCTGGCACG GGCGCTGCAT CAGTTGAGCG CCCGGCGGGA GAAGCGCTTC
ATGGCCATTA ATTGTGCAGC CATCCCGGAG TCGTTGCTGG AGAGTGAATT GTTCGGCTAT
GAAAAGGGTG CTTATACGGG AGCCGTCAAA CAGACGCCCG GAAAAATCGA GCTCGCGCAC
GAAGGCACTT TTTTTCTTGA CGAAGTGGGC GATCTGCCCA TGCCCTTGCA GGCAAAGCTT
CTCCGTTTTT TGCAGGAAAG GGTGATCGAG CGAATAGGGG GTCGGAAGGA AATACCCGTG
GATGTGCGCG TGGTATGCGC CACTCATCAG AATCTCAAGA AACTGATCGA GGATGGACGT
TTTCGCGAAG ATTTGTATTA CCGCTTGAGT GAAATCGTGA TAACCATTCC TCCCTTGCGA
CAGCGGGTGG GGGATGCCGC GCTGCTTGCC CATCATTTCA AGAACAAGTT TTGCATGCAG
GAGAAACGTT CCTCTCTGAA TTTCAGCCAG GAAGCGCTGG CTGCCATTGA AAATCATTCG
TGGCCGGGCA ACGTGCGCGA AATGGAAAAC TGTATCAAGC GTGCGGTCAT CATGGCAGAG
GGTTCGGTAA TCGGCGCGGA TGACCTCGGC CTGTACGGTA CAAGCGCAGC TGAGCCTATC
AACCTTCGCC AGATACGGGA CAGGGCGGAA TGCAATGCGC TGATGAAAGC ATTGGCGAGA
GTGGATGGGA ACGTGGTGAA GGCGGCTGAA TTACTGGGCG TCAGCCGTCC CACTATTTAT
GATCTGATGA ATCGCCATGG TTTGAAGTAA
|
|---|
| Protein sequence | MSQDKKSLLV IEDDPGLQRQ LRWSFDTYEV LVASDRESAL ALVRRHEPAV VTMDLGLPPD
ADGASEGLAT LEQILELVPD TKVIVLTGNQ DHGNALKAIA AGAYDFHQKP FDPNILSLVI
ERAYYLYALQ QENRKLLQAQ MNSPINGLIT RDPVLSKVCR NVEKVAPSDA TVILLGESGT
GKEILARALH QLSARREKRF MAINCAAIPE SLLESELFGY EKGAYTGAVK QTPGKIELAH
EGTFFLDEVG DLPMPLQAKL LRFLQERVIE RIGGRKEIPV DVRVVCATHQ NLKKLIEDGR
FREDLYYRLS EIVITIPPLR QRVGDAALLA HHFKNKFCMQ EKRSSLNFSQ EALAAIENHS
WPGNVREMEN CIKRAVIMAE GSVIGADDLG LYGTSAAEPI NLRQIRDRAE CNALMKALAR
VDGNVVKAAE LLGVSRPTIY DLMNRHGLK
|
|---|
| |