| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A2556 |
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| Symbol | |
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| ID | 3786282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosospira multiformis ATCC 25196 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007614 |
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| Strand | - |
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| Start bp | 2924736 |
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| End bp | 2926697 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637812647 |
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| Product | squalene cyclase |
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| Protein accession | YP_413237 |
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| Protein GI | 82703671 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1657] Squalene cyclase |
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| TIGRFAM ID | [TIGR01507] squalene-hopene cyclase
[TIGR01787] squalene/oxidosqualene cyclases |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.511022 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT TCGGAGGTAT GGCGAGAACT TCATTGCAAG CTCAATCCCC GGGCTCAAAC
AATACTCCCT CAATGGACGA AAAAATGCTG AAAGCGGGAC TGGAAGCGGC ACGCGGTGCG
CTGCTGGCTC AGCAGAGGGA GGATGGCCAC TGGTGCTTTC CATTGGAGGC CGATTGCACG
ATTCCCGCCG AGTATATACT GATGATGCAC TTCATGGATG AAGTGGACCT GGATCTGGAG
GTCAGGATTG CCCGTTTTAT TCGTGAAAAA CAGGATGTAG CGCACGGAGG CTGGCCGCTC
TACTACGGCG GTGAATTCGA TCTGAGTTGT TCGGTCAAGG CCTATTATGC TCTGAAAATT
GTGGGGGACT CCCCGGACGC GCCCCACATG GTGCGTGCGC GTGCAGCAAT TCTGAAACAT
GGCGGCGCAG CGAGAGCAAA TGTATTTACA CGCCTGCTGC TTGCCATGTA TGACCAGCTT
CCCTGGCGAG GCGTGCCATT TGTGCCGGTG GAAATCATAC TGTTCCCCAA GTGGTTTCCA
TTCCATACCA GCAAGGTCGC ATACTGGTCG CGGACCGTAA TGGTTCCGCT ATCTATCCTG
TGCAGCCTGA AGGCGCGCGC GGCGAATCCG CGCAAAGTCG CCATTCGTGA ATTGTTTACG
GTACCTCCGG GGGAGGAGCG GAATTATTTT CCGGTACGTA CTGCGCTCAA TCGCGTGTTT
CTGCTGATCG AGCGCACTCT CTCCCTGCTC GAACCCTTCA TACCCCAAGG GGTGCGCAGA
TTGGCGCTGC GGCGGGCGGA AAGCTGGATC GTGGAAAGGC TGAACGGCGA CTCAGGCCTG
GGGGCGATCT TTCCTGCCAT GGTGAATGCC GGCGAAGCTC TGGCATTGCT TGGATACCCA
TATGATCATC CCGCGCGGGA GCAATGCCGC AAGGCGCTGC GCCTGCTGCT GGTGGAGGAA
GGCGAGCGTA CCTGGTGCCA GCCCTGTGTT TCCCCAGTAT GGGATACCGT CCTGACCTGT
CTCGCCTTTC AGGAGGATAC GGAGGTCGAT CAGAAGCCCA TCCGGAAAGC GCTCGACTGG
CTGGTTCCCT GTCAGGTGCT CGATGCGCCG GCGGACTGGC AAGAAGATCA TCCCGGATTA
CCGGGCGGGG GCTGGGCTTT TCAGTATGCA AATCCCCACT ATCCCGATCT CGACGACACG
GCTGCGGTGG CGTGGGCACT GTACCAGGCC GACCCTAAGG CTTATCAGGA AAGCATCAGC
CGGGCCGCCG ACTGGCTGGC GGGGATGCAG TCCAGCAATG GGGGGTTTGC GGCTTTCGAC
AGCGACAATA CGTATTACTA TCTCAACGAG ATCCCGTTTG CCGATCATGG GGCGCTCCTT
GATCCTCCCA CCAGTGATGT TTCCGCCCGC TGTGCAGGTT TTCTCGCCTT GTACGGCCAG
TCCAGGCATA AACAGGCGCT GGAACGGAGT CTGGCATACC TCTTCAATGA ACAGGAGGCC
AGTGGCGCCT GGTTCGGCCG CTGGGGCAGC AATTACATCT ATGGAACGTG GTCTGTGCTG
GAGGCCTTCC GTCTGGCCGG GATAGATGCC GGTCATCCTG CCATCCGACG CGCGGTGCAC
TGGCTCAAAT CCGTGCAGCG GGAGGATGGC GGATGGGGAG AAAGTAACGA CAGCTATCTT
TCCCCCCAGC AGGCAGGCCA GTTTCATACC AGTACTTCTT TTCATACCGC ATGGGCACTG
CTTGCACTGA TGGGAGCCGG CGAATGGCGA AGTCATGAGG TTCACCGGGG AATTGCCTAC
CTCTTGCGGG AACAGGACAG CGACGGGCTC TGGCATGAGC CCTGGTTTAC CGCTCCCGGC
TTCCCGCGGG TTTTCTACCT CAAGTACTAC GGGTATACGA AATATTTCCC GGTATGGGCA
TTGACCCGAT TTCATGCATT GAACCGGAAG TTCCCCGGGT GA
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| Protein sequence | MKKFGGMART SLQAQSPGSN NTPSMDEKML KAGLEAARGA LLAQQREDGH WCFPLEADCT
IPAEYILMMH FMDEVDLDLE VRIARFIREK QDVAHGGWPL YYGGEFDLSC SVKAYYALKI
VGDSPDAPHM VRARAAILKH GGAARANVFT RLLLAMYDQL PWRGVPFVPV EIILFPKWFP
FHTSKVAYWS RTVMVPLSIL CSLKARAANP RKVAIRELFT VPPGEERNYF PVRTALNRVF
LLIERTLSLL EPFIPQGVRR LALRRAESWI VERLNGDSGL GAIFPAMVNA GEALALLGYP
YDHPAREQCR KALRLLLVEE GERTWCQPCV SPVWDTVLTC LAFQEDTEVD QKPIRKALDW
LVPCQVLDAP ADWQEDHPGL PGGGWAFQYA NPHYPDLDDT AAVAWALYQA DPKAYQESIS
RAADWLAGMQ SSNGGFAAFD SDNTYYYLNE IPFADHGALL DPPTSDVSAR CAGFLALYGQ
SRHKQALERS LAYLFNEQEA SGAWFGRWGS NYIYGTWSVL EAFRLAGIDA GHPAIRRAVH
WLKSVQREDG GWGESNDSYL SPQQAGQFHT STSFHTAWAL LALMGAGEWR SHEVHRGIAY
LLREQDSDGL WHEPWFTAPG FPRVFYLKYY GYTKYFPVWA LTRFHALNRK FPG
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