Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmul_A2427 |
Symbol | secD |
ID | 3785519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosospira multiformis ATCC 25196 |
Kingdom | Bacteria |
Replicon accession | NC_007614 |
Strand | - |
Start bp | 2764848 |
End bp | 2766692 |
Gene Length | 1845 bp |
Protein Length | 614 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637812516 |
Product | preprotein translocase subunit SecD |
Protein accession | YP_413108 |
Protein GI | 82703542 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0342] Preprotein translocase subunit SecD |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCGCT ATCCTGCCTG GAAATACCTC TTTATCGCGG TTTCGATACT GCTTGGTCTG CTCTATACCC TCCCGAATTT CTATGGAGAG TCGCCGGCGG TGCAGATTTC GCCCCTGAGG AATGCGGCCA AGGCTGATAC CGGGTTGTTG AATCGCGTCG AAGAGGCACT TAAAAAAGCC GATCTCCCTA CTACCGGCAT GTTTCTGGAG GGGGGCAGCA TCAAGGTACG CTTTGCCGAT ACCGATACGC AGATCAGGGC AAGGGACGCA CTGCAGTCGC TGCTGGGCAA TGGCTACATG GTGGCACTGA ATCTCCTGCC CAATTCTCCC CAGTGGCTGA CCAGTATAGG CGCACTGCCG ATGTATCTCG GGCTCGATCT CCGCGGTGGC GTCCATTTTC TGCTGGAAGT GGATATGAAA GGCGCCCTCT CCAAAGCCCT TGACCGCTTC AGTTCCGATA TCCGCGGCAG CTTGCGGGAG AAAAAAATTC CCTATGCAGG CCTCGACAAG CGCGGCTCGC TGATCATCGT CAAATTCCGC AATGCAGAAT CGCGCGCGCA GGCAGAGGCG GAAATCAAAA AGAACTATCC TGACCTGGAT TTACGGGAAG AGAATGTCAG CACCGAGTTC CATCTGGCGG CCACGTTGAG GCCGGAGGCA CAGAAGCGCA TTCAGGACGC CGCCGTACAG CAGAACATCA CGACCCTGCG CAATCGTGTC AACGAGCTCG GTGTGGCTGA GCCTATCATT CAGCAGGCCG GAGCAGACCG GGTGGTAGTG CAACTGCCCG GTGTGCAGGA TACCGCCAAA GCCAAGGATA TTCTGGGGCG CACCGCGACA CTCGAAGTCC GCATGGTTGA CGAGGAACAC GACCTCAGCG CGGCACTGAG AGGGCAGATT CCCTTTGGCT CCGAGCTGTA CAGCGAACGC GGAGGCGGGC CATTACTGGT AAAGAAACAG GTAGTGCTGA CAGGTGACCG GATCAACGAT GCGCAGCCGG GCTTCGACAA TAATAACCAG CCCGCGGTGC ACCTCAACCT GGACAACAGC GGAGCCCGCA TTTTCCAGCA GCTTACCCGC GATAACGTCG GCAAGCGCAT GGCCATTCTG CTGATCGAGA AAAACCAGGC CGAAGTGATC ACCGCGCCGG TGATCCGGGA AGAAATCGGC GGTGGAAGGG TGCAGATCAG CGGCCGCATG ACTTCCGAGG AAGCGCGGGA TGTGGCATTG CTGCTACGCG CGGGCGCGCT GGCTGCTCCC ATGGATATCG TCGAGGAGCG AACCGTAGGC CCGAGCCTGG GTGCGGAAAA CATCGAGAGC GGATTTAACT CCACGCTCTA TGGCTTTGCC GCCATCGCCG TCTTCATGAC CATCTATTAT CTGGTATTCG GCTTCATCTC GGTATTGGCA CTCGGGGTCA ACCTGCTGCT GCTGGTCGGC CTGCTTTCGA TTCTGCAGGC AACGCTCACG CTGCCCGGCA TGGCTGCTAT TGCGCTTACC CTGGGGATGG CCATTGACGC CAATGTGCTC ATCAACGAAC GCATACGCGA TGAACTGAGA GAGGGCATGG CGCCGCAGGC GGCGATAAAC GCTGGCTACG AGCGTGCCTG GGCGACCATT CTCGATTCCA ACATCACTAC CCTGATTGCG GGTATCGCTT TGTTTGCATT CGGCTCGGGC CCGATAAAGG GATTTGCAGT GGTGCTGTGC CTGGGTATCC TGACTTCTAT GTTCAGCGCG GTGATGGTCT CGCGCGGATT CGTCAATCTG GTATACGGCA GCCGCCGCAA ACTGGAGCGG GTTTCCATTG GGCAGGTGTG GAAGCCTGTG ACCAACAAGC GCTGA
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Protein sequence | MNRYPAWKYL FIAVSILLGL LYTLPNFYGE SPAVQISPLR NAAKADTGLL NRVEEALKKA DLPTTGMFLE GGSIKVRFAD TDTQIRARDA LQSLLGNGYM VALNLLPNSP QWLTSIGALP MYLGLDLRGG VHFLLEVDMK GALSKALDRF SSDIRGSLRE KKIPYAGLDK RGSLIIVKFR NAESRAQAEA EIKKNYPDLD LREENVSTEF HLAATLRPEA QKRIQDAAVQ QNITTLRNRV NELGVAEPII QQAGADRVVV QLPGVQDTAK AKDILGRTAT LEVRMVDEEH DLSAALRGQI PFGSELYSER GGGPLLVKKQ VVLTGDRIND AQPGFDNNNQ PAVHLNLDNS GARIFQQLTR DNVGKRMAIL LIEKNQAEVI TAPVIREEIG GGRVQISGRM TSEEARDVAL LLRAGALAAP MDIVEERTVG PSLGAENIES GFNSTLYGFA AIAVFMTIYY LVFGFISVLA LGVNLLLLVG LLSILQATLT LPGMAAIALT LGMAIDANVL INERIRDELR EGMAPQAAIN AGYERAWATI LDSNITTLIA GIALFAFGSG PIKGFAVVLC LGILTSMFSA VMVSRGFVNL VYGSRRKLER VSIGQVWKPV TNKR
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