Gene Nmul_A2427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmul_A2427 
SymbolsecD 
ID3785519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosospira multiformis ATCC 25196 
KingdomBacteria 
Replicon accessionNC_007614 
Strand
Start bp2764848 
End bp2766692 
Gene Length1845 bp 
Protein Length614 aa 
Translation table11 
GC content58% 
IMG OID637812516 
Productpreprotein translocase subunit SecD 
Protein accessionYP_413108 
Protein GI82703542 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0342] Preprotein translocase subunit SecD 
TIGRFAM ID[TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR01129] protein-export membrane protein SecD 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCGCT ATCCTGCCTG GAAATACCTC TTTATCGCGG TTTCGATACT GCTTGGTCTG 
CTCTATACCC TCCCGAATTT CTATGGAGAG TCGCCGGCGG TGCAGATTTC GCCCCTGAGG
AATGCGGCCA AGGCTGATAC CGGGTTGTTG AATCGCGTCG AAGAGGCACT TAAAAAAGCC
GATCTCCCTA CTACCGGCAT GTTTCTGGAG GGGGGCAGCA TCAAGGTACG CTTTGCCGAT
ACCGATACGC AGATCAGGGC AAGGGACGCA CTGCAGTCGC TGCTGGGCAA TGGCTACATG
GTGGCACTGA ATCTCCTGCC CAATTCTCCC CAGTGGCTGA CCAGTATAGG CGCACTGCCG
ATGTATCTCG GGCTCGATCT CCGCGGTGGC GTCCATTTTC TGCTGGAAGT GGATATGAAA
GGCGCCCTCT CCAAAGCCCT TGACCGCTTC AGTTCCGATA TCCGCGGCAG CTTGCGGGAG
AAAAAAATTC CCTATGCAGG CCTCGACAAG CGCGGCTCGC TGATCATCGT CAAATTCCGC
AATGCAGAAT CGCGCGCGCA GGCAGAGGCG GAAATCAAAA AGAACTATCC TGACCTGGAT
TTACGGGAAG AGAATGTCAG CACCGAGTTC CATCTGGCGG CCACGTTGAG GCCGGAGGCA
CAGAAGCGCA TTCAGGACGC CGCCGTACAG CAGAACATCA CGACCCTGCG CAATCGTGTC
AACGAGCTCG GTGTGGCTGA GCCTATCATT CAGCAGGCCG GAGCAGACCG GGTGGTAGTG
CAACTGCCCG GTGTGCAGGA TACCGCCAAA GCCAAGGATA TTCTGGGGCG CACCGCGACA
CTCGAAGTCC GCATGGTTGA CGAGGAACAC GACCTCAGCG CGGCACTGAG AGGGCAGATT
CCCTTTGGCT CCGAGCTGTA CAGCGAACGC GGAGGCGGGC CATTACTGGT AAAGAAACAG
GTAGTGCTGA CAGGTGACCG GATCAACGAT GCGCAGCCGG GCTTCGACAA TAATAACCAG
CCCGCGGTGC ACCTCAACCT GGACAACAGC GGAGCCCGCA TTTTCCAGCA GCTTACCCGC
GATAACGTCG GCAAGCGCAT GGCCATTCTG CTGATCGAGA AAAACCAGGC CGAAGTGATC
ACCGCGCCGG TGATCCGGGA AGAAATCGGC GGTGGAAGGG TGCAGATCAG CGGCCGCATG
ACTTCCGAGG AAGCGCGGGA TGTGGCATTG CTGCTACGCG CGGGCGCGCT GGCTGCTCCC
ATGGATATCG TCGAGGAGCG AACCGTAGGC CCGAGCCTGG GTGCGGAAAA CATCGAGAGC
GGATTTAACT CCACGCTCTA TGGCTTTGCC GCCATCGCCG TCTTCATGAC CATCTATTAT
CTGGTATTCG GCTTCATCTC GGTATTGGCA CTCGGGGTCA ACCTGCTGCT GCTGGTCGGC
CTGCTTTCGA TTCTGCAGGC AACGCTCACG CTGCCCGGCA TGGCTGCTAT TGCGCTTACC
CTGGGGATGG CCATTGACGC CAATGTGCTC ATCAACGAAC GCATACGCGA TGAACTGAGA
GAGGGCATGG CGCCGCAGGC GGCGATAAAC GCTGGCTACG AGCGTGCCTG GGCGACCATT
CTCGATTCCA ACATCACTAC CCTGATTGCG GGTATCGCTT TGTTTGCATT CGGCTCGGGC
CCGATAAAGG GATTTGCAGT GGTGCTGTGC CTGGGTATCC TGACTTCTAT GTTCAGCGCG
GTGATGGTCT CGCGCGGATT CGTCAATCTG GTATACGGCA GCCGCCGCAA ACTGGAGCGG
GTTTCCATTG GGCAGGTGTG GAAGCCTGTG ACCAACAAGC GCTGA
 
Protein sequence
MNRYPAWKYL FIAVSILLGL LYTLPNFYGE SPAVQISPLR NAAKADTGLL NRVEEALKKA 
DLPTTGMFLE GGSIKVRFAD TDTQIRARDA LQSLLGNGYM VALNLLPNSP QWLTSIGALP
MYLGLDLRGG VHFLLEVDMK GALSKALDRF SSDIRGSLRE KKIPYAGLDK RGSLIIVKFR
NAESRAQAEA EIKKNYPDLD LREENVSTEF HLAATLRPEA QKRIQDAAVQ QNITTLRNRV
NELGVAEPII QQAGADRVVV QLPGVQDTAK AKDILGRTAT LEVRMVDEEH DLSAALRGQI
PFGSELYSER GGGPLLVKKQ VVLTGDRIND AQPGFDNNNQ PAVHLNLDNS GARIFQQLTR
DNVGKRMAIL LIEKNQAEVI TAPVIREEIG GGRVQISGRM TSEEARDVAL LLRAGALAAP
MDIVEERTVG PSLGAENIES GFNSTLYGFA AIAVFMTIYY LVFGFISVLA LGVNLLLLVG
LLSILQATLT LPGMAAIALT LGMAIDANVL INERIRDELR EGMAPQAAIN AGYERAWATI
LDSNITTLIA GIALFAFGSG PIKGFAVVLC LGILTSMFSA VMVSRGFVNL VYGSRRKLER
VSIGQVWKPV TNKR