Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmul_A2343 |
Symbol | |
ID | 3784747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosospira multiformis ATCC 25196 |
Kingdom | Bacteria |
Replicon accession | NC_007614 |
Strand | - |
Start bp | 2670156 |
End bp | 2670998 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637812434 |
Product | squalene/phytoene synthase |
Protein accession | YP_413026 |
Protein GI | 82703460 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1562] Phytoene/squalene synthetase |
TIGRFAM ID | [TIGR03465] squalene synthase HpnD |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.149671 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACCTG ACCAGTATTG CCAGGAAAAA GCTGTTCAAA GCGGTTCGAG CTTCTACTAC AGCTTTCTCT ATCTGCCCCC TGAGAGGCGT CGTGCCATTA CTGCACTCTA CGCTTTTTGT CGAGAGGTGG ACGATGTCGT GGACGAGTGT ACGGAAGCAT CAGTAGCGCG AGTAAAGCTT GCATGGTGGC GACAGGAAGT TGCTGCGATC TTCGATGCAG GGGGAAACAA GCCCAGCCAC CCCGTGGCAC AGGCATTGGC AGGCGTGGCA AGCACGTTCA ATCTGACCGC AGACCGTCTG AACGAGATCA TAGACGGTAT GGAAATGGAT CTCGATTATA ACCGCTACGC AGATTTCGAT ACCCTTCGGC ACTACTGTTA CCATGTGGCA AGCGTAGTGG GATTATGCTC CGCTGAGATA TTCGGCTACC GCAATCCGAA AACGCTCGAA TATGCCCAGG ATCTCGGGCT GGCATTCCAG CTTACCAATA TCATACGCGA CGTCGGCGAG GATGCCCGGC GCGACCGTAT TTATCTGCCT CAGGACGAGC TCGCGCGCTT CGGGGTGAGC AATGAAGATA TACTCCAGTC GCGTGAAACA GACAATTTCC GGCGTTTAAT CGAATTTCAG ATCGACCGGG CGGAAAGTTA TTATGCAAAC GCTTTTGCGG CGCTGCCGGA GGAGGATCGC AAAAGCCAGC GTTCCGGGAT CATCATGGCG GCGATCTATC AGGCCTTGCT GAAGGAGATC AAGGCTGATG GATGTCATGT GATGCGGCAG CGTATAAGCC TCACGCCGCT GCGTAAGCTC TGGATAGCAT GGAAAACCTG GATGAAAGGA TGA
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Protein sequence | MTPDQYCQEK AVQSGSSFYY SFLYLPPERR RAITALYAFC REVDDVVDEC TEASVARVKL AWWRQEVAAI FDAGGNKPSH PVAQALAGVA STFNLTADRL NEIIDGMEMD LDYNRYADFD TLRHYCYHVA SVVGLCSAEI FGYRNPKTLE YAQDLGLAFQ LTNIIRDVGE DARRDRIYLP QDELARFGVS NEDILQSRET DNFRRLIEFQ IDRAESYYAN AFAALPEEDR KSQRSGIIMA AIYQALLKEI KADGCHVMRQ RISLTPLRKL WIAWKTWMKG
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