| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A2334 |
|---|
| Symbol | |
|---|
| ID | 3785324 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosospira multiformis ATCC 25196 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007614 |
|---|
| Strand | - |
|---|
| Start bp | 2657292 |
|---|
| End bp | 2659559 |
|---|
| Gene Length | 2268 bp |
|---|
| Protein Length | 755 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637812422 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_413017 |
|---|
| Protein GI | 82703451 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTTACCC AATTTCTGAA TAAGGCCCCA ACCTTGCCAG CCACGCACCT CCTTCCCGCA
TTCCTTGCTG TTCTGGTGTG CGCCTGCAGC GGCAACCCGT GGAACAGTCC ATATCCTGCC
GCGGATGCGG AAAAAAATAT ACTTTATGCA GCTTTTGCCG AACGCCCCAA GCATCTGGAC
CCCGTGCAGT CCTACAGTTC CAATGAGATT CTTTTTACGG CGCAGATATA TGAACCGCCG
CTGCAATACC ATTACCTGAA ACGCCCCTAC GAATTGATTC CCGCTACCGC GACGAAAATG
CCGGAGGTGC ATTATTTCGA TGAAAAAGGC GCGCGCCTGG GCGACAATGT GGACGCCGCT
CAGATCGCCT TTACCGTTTA TGAAATTTCA ATCAAGTCCG GTATACGTTA TCAACCTCAT
CCGGCCTTTG CCAGGGACTC ACAGGGAAAG TTCCTTTATC ACCGGCTTGG CGAGGAGGAC
GTACGTGGCA TTTACAAGTT GAGCGATTTT CCACAAACCG GCTCCCGGGA ACTCACGGCT
GCGGATTACG TTTTCCAGGT CAAGCGGCTG GCTCATCCCC GGCTGCACTC TCCCATTTTT
GGCCTGATGT CCGATTACAT CGTGGGCCTC AAGGAATATG CGGCGATGCT CGAGATGGCG
GCCAAAGAGC AGTCCAGGGA GCAGGGGGAG CAGAGCGGAG GCGAGCAGGA CGGCGAGGAT
TACCTGGATC TTGCGCGTTA CCCCCTGGAG GGGGCCGAAG TGGTGGACCG GTATACCTAT
CGCATCAAGA TCAAGGGCAA ATATCCCCAG TTCAGGTACT GGCTCACCAT GCCTTTTTTC
GCTCCTATTC CTTGGGAGGC TGAGCGCTTC TACAGTCAGA AAGGATTGGC AGAAAAAAAT
ATCAACCTCG ACTGGTATCC CGTCGGGACC GGCCCTTATA TGCTGTCGGA AAATAACCCC
AATCGGACAA TGGTCCTGGA AAGGAATCCC AATTTTCATG GCGAAACCTA TCCTGCCGAT
GGAATGCCAG GAGATGTGGA AGCGGGGTTG CTGAAAGATG CGGGCAAGCC CCTGCCTTTT
ATAGAAAAGA TCGTATATAG CCGGGAGAAG GAAAGCATTC CGCGCTGGAA CAAGTTTCTG
CAGGGTTACT ACGATTCATC GAATATCGGT TCCGACAGTT TCGACCAGGC CGTGCAGTTG
ACAGGACAGG GAGAAGCCAC CGTAACCGAA GCCATGAAGG AGCAGGGCAT TCGGCTGGAA
ACGGCTGTTG CGGCTTCCAC AAACTATGTC GGTTTCAACA TGCTCGACCC GGTCGTCGGC
GGGGTGGGGA AGCATGGCCG CGAATCGGCC AGGAAGTTGC GCCAGGCGAT TTCCATTGCG
GTGGATTATG AGGAGTATGT CTCCATATTT GCCAACGGGC GTGGGATTCC CGCGCAAGGT
CCGATTGCTC CCGGCATTGC CGGTCACCGG GAGGGTAAGG AAGGCATCAA CCCGGTTGTC
TATGAGTGGG TAAACGGACG GTCCCGCCGC AAATCCGTCG AAGTGGCCAA GGCATTACTG
GCAGAGGCAG GCTATCCCAA CGGTATCAGC GCGAAAACCG GCGCGCCCCT CGTACTTTAT
TTCGATGTCA CGGCTCGCGG CGCGGAGGAT AAATCCAGTC TCGACTGGAT GCGCAAGCAA
TTTCAGAAAC TCAACATCCA GTTGGTGGTG CGCAGCACGG ACTACAACCG CTTTCAGGAC
AAGATCCGCA AGGGTAATGC CCAGATTTTC GAGTGGGGCT GGAACGCCGA CTATCCCGAT
CCGGAGAATT TCCTGTTCCT GTTACATGGC CCGCAGCAGA AGGTAGACCA TGAAGGCGAG
AACGCTTCCA ATTACTCCAA TTCCGAATAT AACCGGTTGT TCGAGCAAAT GAAGAATATG
GAGAACGGTC CCGCTCGCCA GAAAATCATC GATAGAATGG TCAATATCCT GCGTCATGAC
GCACCCTGGC TATGGGGCTA TCATCCCAAG GATTATGGCC TGTATCACTC ATGGTATGGC
AACGTAAAGC CGAACAGGAT GTCAAACAAC AATGCCAAAT ATCTGCGCAT TGATGGCGTT
TTGCGTGAGC AGAAGCGGCG TGAATGGAAT GAACCAGTAG TCTGGCCGAT GGTTGTAGGA
CTGGCCGTGC TTGCCGGAAG TCTGCTTCCC GCCGTGCTTG TTTACCGGCG TAGGGAACGA
GGGAGAGGAA TATCGGATGT TGCGCTGAAA ATGGAAGCGC AGGGGTAG
|
|---|
| Protein sequence | MFTQFLNKAP TLPATHLLPA FLAVLVCACS GNPWNSPYPA ADAEKNILYA AFAERPKHLD
PVQSYSSNEI LFTAQIYEPP LQYHYLKRPY ELIPATATKM PEVHYFDEKG ARLGDNVDAA
QIAFTVYEIS IKSGIRYQPH PAFARDSQGK FLYHRLGEED VRGIYKLSDF PQTGSRELTA
ADYVFQVKRL AHPRLHSPIF GLMSDYIVGL KEYAAMLEMA AKEQSREQGE QSGGEQDGED
YLDLARYPLE GAEVVDRYTY RIKIKGKYPQ FRYWLTMPFF APIPWEAERF YSQKGLAEKN
INLDWYPVGT GPYMLSENNP NRTMVLERNP NFHGETYPAD GMPGDVEAGL LKDAGKPLPF
IEKIVYSREK ESIPRWNKFL QGYYDSSNIG SDSFDQAVQL TGQGEATVTE AMKEQGIRLE
TAVAASTNYV GFNMLDPVVG GVGKHGRESA RKLRQAISIA VDYEEYVSIF ANGRGIPAQG
PIAPGIAGHR EGKEGINPVV YEWVNGRSRR KSVEVAKALL AEAGYPNGIS AKTGAPLVLY
FDVTARGAED KSSLDWMRKQ FQKLNIQLVV RSTDYNRFQD KIRKGNAQIF EWGWNADYPD
PENFLFLLHG PQQKVDHEGE NASNYSNSEY NRLFEQMKNM ENGPARQKII DRMVNILRHD
APWLWGYHPK DYGLYHSWYG NVKPNRMSNN NAKYLRIDGV LREQKRREWN EPVVWPMVVG
LAVLAGSLLP AVLVYRRRER GRGISDVALK MEAQG
|
|---|
| |