| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A2228 |
|---|
| Symbol | |
|---|
| ID | 3784929 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosospira multiformis ATCC 25196 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007614 |
|---|
| Strand | - |
|---|
| Start bp | 2528869 |
|---|
| End bp | 2530254 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637812316 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_412912 |
|---|
| Protein GI | 82703346 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.568651 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCCCT CATCGTCTTC CGAGAAACTG TCACCCCCAG AGATACGCGC GATCGCGGGC
CTGGCGAGTA TTTACGGCCT CCGCATGCTG GGAATGTTCA TCATTCTCCC GGTATTCGCG
TTTTACGCCG AACATCTGCC GGGAGGCGAC AATTACACGC TGGTCGGGAT TGCACTGGGC
GCGTACGGGT TGACGCAGGC GATATTGCAG GTTCCGTTCG GCTGGCTGTC TGATCGCTTC
GGCCGCAAAC CGGTGATTTA TGGCGGCCTG CTCCTGTTCG CCCTGGGCAG TTTTGTCGCA
GCCGCAGCAA CGGATATTTA CTGGGTAATC GCTGGCCGTG TCATCCAGGG AGCAGGGGCG
ATTTCGGCGG CTGTGATGGC GCTTGCCGCG GATCTCACAC GCGAAGAACA CCGCACCAAG
GCAATGGCGG CGATCGGCAT GACGATAGGA ACTACCTTCG CGCTGTCTCT GGTCATTGCG
CCGTCGCTCA ACCGCATGAT TGGCGTGCCC GGAATTTTCT TCATGACAGG GGTGCTGGTG
CTGCTGGCGA TGATCGTAGT TTCGCGGGTG GTTCCCAACC CGACAGACAG GCGGTTCCAT
TCGGATACGG AAGCGTCCGC AGGGGGAATT TTTAATGTCC TCCGAAATCC GGAACTGTTG
CGCCTCGATT TTGGTGTCTT CGCATTGCAC GCCGTACTGA TGGCCCTATG GCTGGTGGTA
CCGCTATCGC TGCGGCAGGC AGGGCTGGCA GCGGATCATC ACTGGCAAAT CTATTTTCCC
GCGCTGGTCA TTTCCATGCT GCTGATCATT CCAGTGATCA TCTATAGCGA AAAGAAGGCA
AAGCTAAAGC AAGTGTTTGT CATATCCGTC GCTGTGCTGC TGGTAAGCCA GATCCTGCTG
GCCTATACAT TCGATTCGAT ATGGGGCACT GCGGGTGCGC TGCTGGTATT CTTCACCGCC
TTCAATCTGC TGGAAGCGAC GCTGCCTTCG CTCATTTCCA AGATCGCTCC CGTAGGGGCA
AAAGGCACCG CCATCGGGGT CTATAGCAGT GTCCAGTTCC TGGGTACGTT TATTGGTGCC
AGCGCCGGGG GCTATCTCTA TCAGCATTAC GGAAGTACCG CACTGTTTGC ATTCTGCGGG
GCGCTTCTCA TGTTGTGGCT GATATTTGCC GTTACCATGA AGGCGCCCGC AGCTGTTCGT
ACCAGGATGT ACCACGTGCA GGTAATGGAT ACCGGCACCG CCCACGGGCT TTCGCGGCAA
CTGGCGGCGC TGCCCGGTGT GCATGAGGCG CTGGTGCTTG CGAGCGAAGG GGTGGCTTAC
CTGAAAGTAG ATATGCGTGG TTTTGATGAG CAGGGCGTTG CTCAATTACT TGGAGGGGAA
GCATAA
|
|---|
| Protein sequence | MSPSSSSEKL SPPEIRAIAG LASIYGLRML GMFIILPVFA FYAEHLPGGD NYTLVGIALG
AYGLTQAILQ VPFGWLSDRF GRKPVIYGGL LLFALGSFVA AAATDIYWVI AGRVIQGAGA
ISAAVMALAA DLTREEHRTK AMAAIGMTIG TTFALSLVIA PSLNRMIGVP GIFFMTGVLV
LLAMIVVSRV VPNPTDRRFH SDTEASAGGI FNVLRNPELL RLDFGVFALH AVLMALWLVV
PLSLRQAGLA ADHHWQIYFP ALVISMLLII PVIIYSEKKA KLKQVFVISV AVLLVSQILL
AYTFDSIWGT AGALLVFFTA FNLLEATLPS LISKIAPVGA KGTAIGVYSS VQFLGTFIGA
SAGGYLYQHY GSTALFAFCG ALLMLWLIFA VTMKAPAAVR TRMYHVQVMD TGTAHGLSRQ
LAALPGVHEA LVLASEGVAY LKVDMRGFDE QGVAQLLGGE A
|
|---|
| |