Gene Nmul_A2085 details

Gene Information

• Locus tag: Nmul_A2085
• Symbol: rho
• ID: 3786089
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosospira multiformis ATCC 25196
• Kingdom: Bacteria
• Replicon accession: NC_007614
• Strand: +
• Start bp: 2377975
• End bp: 2379234
• Gene Length: 1260 bp
• Protein Length: 419 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 637812174
• Product: transcription termination factor Rho
• Protein accession: YP_412771
• Protein GI: 82703205
• COG category: [K] Transcription
• COG ID: [COG1158] Transcription termination factor
• TIGRFAM ID: [TIGR00767] transcription termination factor Rho

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATCTAT CCGACCTCAA AAACTTCCAC GTCACCGAAC TGGTGGAAAT GGCAATTGCC 
AATGAAATTG ACGGTGCTAA CCGGTTACGG AAACAGGATC TGATTTTCGC ATTATTGAAG 
AATCAGGCAC GGAAAGGCGA AAGCATTTTC GGCGAAGGCA CCTTGGAAGT GCTGCAGGAT 
GGTTTTGGCT TCTTGCGTTC TCCCGACACC TCATATCTCG CCGGTCCGGA TGACATTTAT 
GTCTCACCCA GCCAGATACG GCGCTTCAAC CTTCATACGG GGGATTCGAT AGAGGGCGAA 
ATAAGGACGC CCAAGGACGG GGAGCGTTAT TTCGCGCTGG TCAAGGTCGA TAAGGTCAAC 
GGAGAACCTC CTGAAAACTC CAAACACAAG ATACTGTTTG AAAATCTCAC CCCCCTCTTT 
CCCACCGAGC GGCTGCAGCT CGAACGCGAG ATCAAGGCCG AGGAAAACGT TACCAGTCGC 
ATCATCGATC TGATCGCCCC CATCGGCAAA GGACAGCGGG GCCTCCTGGT AGCCAGTCCC 
AAATCAGGCA AGACGGTCAT GCTTCAGCAC ATCGCCCACG CCATTGCCGC CAATTACCCG 
GATGTGATGC TGATGGTGCT GCTGATAGAC GAGCGTCCCG AAGAAGTGAC CGAGATGATC 
CGGTCGGTAA GAGGTGAAGT GATTTCTTCC ACTTTCGATG AGCCGGCTGT ACGTCACGTG 
CAAGTGGCGG ATATGGTCAT CGAAAAAGCC AAACGGTTGG TGGAACACAA GAAGGACGTG 
GTAATCCTGC TGGATTCGAT CACCCGGCTC GCGCGCGCCT ATAACACAGT GGTACCTGCT 
TCCGGCAAGG TGCTGACGGG GGGTGTGGAT GCCAACGCGC TGCAACGGCC GAAGCGGTTT 
TTTGGGGCTG CTCGCAATAT CGAGGAGGGT GGCTCTCTCA CCATTATTGC CACCGCGCTG 
GTCGACACCG GCTCGCGCAT GGACGATGTG ATTTATGAGG AATTCAAGGG TACCGGCAAC 
ATGGAAATCC ATCTTGACCG GCGCATGGCA GAAAAACGCA TTTATCCCGC CATCAACGTC 
AACCGTTCCG GCACCCGCCG GGAAGAACTC CTGATCAAGC CCGATGTATT GCAGAAAATC 
TGGGTACTGC GCAAGCTGCT CTACCCGATG GATGACATGG AGGCAATGGA ATTTCTGCTC 
GACAAGATCA AGGCAACGAA GAACAACGCG GATTTCTTCG ATTCAATGCG GCGGGTCTAA 

 

Protein sequence

MHLSDLKNFH VTELVEMAIA NEIDGANRLR KQDLIFALLK NQARKGESIF GEGTLEVLQD 
GFGFLRSPDT SYLAGPDDIY VSPSQIRRFN LHTGDSIEGE IRTPKDGERY FALVKVDKVN 
GEPPENSKHK ILFENLTPLF PTERLQLERE IKAEENVTSR IIDLIAPIGK GQRGLLVASP 
KSGKTVMLQH IAHAIAANYP DVMLMVLLID ERPEEVTEMI RSVRGEVISS TFDEPAVRHV 
QVADMVIEKA KRLVEHKKDV VILLDSITRL ARAYNTVVPA SGKVLTGGVD ANALQRPKRF 
FGAARNIEEG GSLTIIATAL VDTGSRMDDV IYEEFKGTGN MEIHLDRRMA EKRIYPAINV 
NRSGTRREEL LIKPDVLQKI WVLRKLLYPM DDMEAMEFLL DKIKATKNNA DFFDSMRRV