| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A1957 |
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| Symbol | |
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| ID | 3785135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosospira multiformis ATCC 25196 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007614 |
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| Strand | + |
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| Start bp | 2248290 |
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| End bp | 2251217 |
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| Gene Length | 2928 bp |
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| Protein Length | 975 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637812045 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_412644 |
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| Protein GI | 82703078 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCAGG ATAAGTATTT TCATAATCAG GCTATGCAGA GAAATGGAGC GATAGCACCT
GAAAAGCCCC AAAAATTTCT GGGACTGAAA TGGAAAGTTT TGTTGCTGAG CAGCCTTATA
CTGATTGCCA TCGTAGTCTC ATTCACTGGG ATTACCTATC TGAGCCTGAT GGATGACTTC
GAGAGCCAGA GAAATGCCCA GCACCAGCGC TATGCCAAGG AAGTTGAAGG ACTGATCGAC
CAGGTTTCGA TAAATTTGCA TCAACTCGCC GGATTGATTC CTTTCCTGGA AGGAATGGAT
AAAAGTCTGC TCTCAGGTAA CAAGGAATAC GTCACCCAAG CATTTGATCC ATATTGGTCG
CCTTTGCAAC TCAATAAAGG TATCGAATTG CTGCGTTTTT ACGATAGCTC AAACCAGCAA
TTGGCAGGAT GGGGAACTTC CCAGCCTAAT ACTTACGACG CATTGATGTC AGCCTGGGTG
CACGAGGTGA ATGCCCAGGA AAAGCCGATG AGCCATCTCA GCTGCCCCAC CAGCTGCATG
CAGTTTGCCG TGGCACCCTT GCTCGTGGAA GGTAACAACG TCGGCGTGAT CGTCATCGGA
ACGCCCCTGG TCGATGTGAT TCTGGGTTTC AAGGATATCT CGGGTGCCGA TATCGCATTG
CTGGTGAGGG AAAAAGGCGA TTTGCCCGAA AGCAACAAGG TGAAAATTGC AAACTGGGAT
GTCACGCTTG CGGCACACAG CAGGGAAATG AACATTACTG TTCTGGATGA AGTTGCAGCG
AATTATCCGG ACCTGGAGAG TCTGGAGGAG GGCATCCTGG TTTCGTGGCA CGATAGACAC
CTCCAGATAA AGCCGCTGTT TCTGGAGAGA ATGGCCGTGT CGGAAGATGG TGCTCGCTTC
ATGGTTGTAA CTGACATCAC CTCCACGATC CGCACCATTC ACAGCTCGAC CCAGCAAAAC
ATGATAATCG GCGTGGTCGG GCTCATATTC TCTGAAATAC TGCTGTTCAT CATTCTCACC
AAGCCACTGT CGAGGCTCAA GCACATCGTT TTTACTCTCC CTCTTCTGGC CCGCAGCAGT
TTCAAGAATT TTCGCCTGGA GCTTCGCTCT GCCGGCCAGA AACGATGGAT GAAAGATGAA
ATTGACCTGC TGGATGAAAC AGCGGTGGCC CTGTCACATC AACTGGAGAA GCTCGAGGAT
CAGGTGGCGG ACAGGACCCG TATACTGGCC AGCAAGATGG ACGAGCTAAG CAAGGAGAGG
GATTTCATTA ACAATCTGCT GGACATTGCG CAAGTAATCG TAATCACGCA AAAGGCGGAT
GGCGAGATTC TCACACTCAA TGCCTATGGT GAAACGCTTA TTCAGTATAC GGAAAAAGAA
CTGCAGGGAA CGCCCTTTCT CCATCTTCTG GCACTCGATG GAAATCTGCA CGACCTTCCC
GTTCACCTGG AAGAGGTGCG GTGCCAACGA AGAGACCAGC TTCGGCACGA AGCGAATGTC
GTATGCAAGG ATGCTTCCAT TCGTAATATT CTGTGGCTGC ATTCACGCCT CACCCGGCAC
AGCGAGGATG ACCCCGCAAT GTTATCGGTG GGTCTCGACA TGACGGAACA CAAGCGTGCT
GAAGGGCGTC TTGCCTGGCT GGCGGATCAT GATCCGCTCA CGGATCTTTT CAATCGCCGC
CGCTTCCAGG AAGAACTGGA ACAGATGCTG AATCTTGCCG CGCGTTACGG GTACTCGGGA
GCCTTGCTCT TTTTTGACCT TGATCAGTTC AAATACATCA ACGATACCAG CGGGCATCAG
GCGGGGGATG CCTTGCTTAA AATGGTCGCG CGTCTGCTGC TTGGCAATAT TCGCAGCGTC
GACATACTTG GCCGCCTGGG AGGCGATGAA TTCGCAGTGA TTTTGCCCCA AACGACAGCC
GAAGGGGCGA TAGAAGTGGC AAAAAATACG CTTGCGAGCC TGAATCAGGG AAAGATTACG
ATAAATGGTC GCACTCATAA AGCGTCAGCC AGCGTCGGTA TCGCACTTTT TCCGGAGCAC
GGCAGCAATG TCCATGATCT CCTGGCCGCA GCCGATCTCG CCATGTATCA GGCAAAGGAA
GCCGGACGAG GAGGATGGCA TTTGTTTTCT GACGAAGAGA AAACACGTGA ACGCATGCAT
ACTCTTGTCT ATTGGAAGGA GAAGATTGAG TATGCTCTTT CACACGAACG TTTCCTGTTC
TATTTCCAGC CCATCATGCA TGTTCGACGC AGGACCATCG ATCATTACGA GGTGCTGCTT
CGCATGATCG ACAATGATGG AACTGTTCTT GCACCCCAGT TTTTCATCCC CGCCGCGGAA
CAGACAGGTC TTATTCATGC CATCGACCAT ATGGTTTTAC GTAAATCCAT TGCGCAATCA
GCTGAAATAC AACGCGCCGG TCAGTGCATC CGTTTTTCCA TAAACTTGTC GGCGCATGCA
TTTCACGATC CGGAACTGCT GCCGATACTG AAAGATGCAT TTGCCGAGTA TGGCGCGGAT
CCATCGAATT TCATGTTTGA AATAACCGAG ACAGCAGCGC TTGAGGATTT GCCCGCGGCG
CGGGAACTCA TGGAGATGAT TAAAAAGCTG GGCTGCAGTT TCACGCTGGA TGATTTCGGT
GTCGGTTTCT CCTCCTTCTA TTACATCCGG CAACTGCCGA TCGATGTTGT AAAGATCGAT
GGCTCCTTCA TACGAAATCT GGCAGACAGC CCCGATGACC AAATACTGGT GCAGGCTTTG
TGCGATGTGG CAAGGGGATT CGGAAAGAAG ACAACGGCGG AGTTCGTGGA AAATGCAGCG
ACCTTTTCAA TCCTTGAGAA AATGCAGATC GACTATGCCC AGGGATTTTT GATTGGAACG
CCTTCTCCCG CTTATGACAC ATCGTTCAGC GATTTCGCGA AGATGTGA
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| Protein sequence | MLQDKYFHNQ AMQRNGAIAP EKPQKFLGLK WKVLLLSSLI LIAIVVSFTG ITYLSLMDDF
ESQRNAQHQR YAKEVEGLID QVSINLHQLA GLIPFLEGMD KSLLSGNKEY VTQAFDPYWS
PLQLNKGIEL LRFYDSSNQQ LAGWGTSQPN TYDALMSAWV HEVNAQEKPM SHLSCPTSCM
QFAVAPLLVE GNNVGVIVIG TPLVDVILGF KDISGADIAL LVREKGDLPE SNKVKIANWD
VTLAAHSREM NITVLDEVAA NYPDLESLEE GILVSWHDRH LQIKPLFLER MAVSEDGARF
MVVTDITSTI RTIHSSTQQN MIIGVVGLIF SEILLFIILT KPLSRLKHIV FTLPLLARSS
FKNFRLELRS AGQKRWMKDE IDLLDETAVA LSHQLEKLED QVADRTRILA SKMDELSKER
DFINNLLDIA QVIVITQKAD GEILTLNAYG ETLIQYTEKE LQGTPFLHLL ALDGNLHDLP
VHLEEVRCQR RDQLRHEANV VCKDASIRNI LWLHSRLTRH SEDDPAMLSV GLDMTEHKRA
EGRLAWLADH DPLTDLFNRR RFQEELEQML NLAARYGYSG ALLFFDLDQF KYINDTSGHQ
AGDALLKMVA RLLLGNIRSV DILGRLGGDE FAVILPQTTA EGAIEVAKNT LASLNQGKIT
INGRTHKASA SVGIALFPEH GSNVHDLLAA ADLAMYQAKE AGRGGWHLFS DEEKTRERMH
TLVYWKEKIE YALSHERFLF YFQPIMHVRR RTIDHYEVLL RMIDNDGTVL APQFFIPAAE
QTGLIHAIDH MVLRKSIAQS AEIQRAGQCI RFSINLSAHA FHDPELLPIL KDAFAEYGAD
PSNFMFEITE TAALEDLPAA RELMEMIKKL GCSFTLDDFG VGFSSFYYIR QLPIDVVKID
GSFIRNLADS PDDQILVQAL CDVARGFGKK TTAEFVENAA TFSILEKMQI DYAQGFLIGT
PSPAYDTSFS DFAKM
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