Gene Nmul_A1953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmul_A1953 
Symbol 
ID3785130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosospira multiformis ATCC 25196 
KingdomBacteria 
Replicon accessionNC_007614 
Strand
Start bp2242655 
End bp2244862 
Gene Length2208 bp 
Protein Length735 aa 
Translation table11 
GC content54% 
IMG OID637812040 
ProductVacB/RNase II family 3'-5' exoribonuclease 
Protein accessionYP_412640 
Protein GI82703074 
COG category[K] Transcription 
COG ID[COG0557] Exoribonuclease R 
TIGRFAM ID[TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.223171 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACAATCA AGAAGAAACA AAAGCTCCGC AAGCTTGACC CTTATCTTGA ACGGGAAAAA 
GAGCATTATG GGCATGCGCT GCCTAGCCGG GAATTCATAC TCCAGATACT CGAAGAGCAA
GGCGTTCCCG TACCCGAGGA AGCATTGCAG AACCTGCTCG GAATCACCGA AGAAGAAGGC
GAGATCTTCA GCCGCCGTCT TTCTGCCATG TTGCGCGAAG GCCAGATCAT GCGCAACCGG
AAGGGCGATA TCTGCATGGT GGAGAAGCTC GCTCTTATCA AAGGCAAGGT TCAGGGTCAC
CCGGATGAAT TTGGTTTTCT GATACCTGAC GATGGCAGTC CCGATTTGTT TTTGAGTGCC
AAAGAAATGC GCAAGGCGCT GCATGGCGAC CGCGTGATGG TGCGTGAAAT CGGGGTTGAC
CGGCGAGGCC GCCGGGAGGG AGCCATCGTA GAGGTGCTGG AGCGCGCAGT AACGCAGTTG
GTGGGACGAT TACATGCGGA TCACGGAATT CTTTACGTGG AGGCGGAGAA TAGACGTATC
AGCCAGGACA TTCTGATTCC CCGAGAAGAA TCGATGAATG CAAGGGCAGG CCAGGTGGTC
ATCGTGGAAA TCCTCCAGCA GCCGAGTAAA CATGCCCAGC CTATTGGGCG CATCATCGAG
ATTTTGGGCG ACTACACGGC CCCCGGAATG GAGATCGAAA TCGCGCTTCG CAAGCACGAC
TTGCCTTACC AGTTTCCACA GGAAGTGGAA AAACTTTCGG CACGTCTTCC ATCCAAGGTG
TTAAAAAAAG ACCTGATCAA GAGAGAAGAC CTTCGTCACC TTCCGCTGGT GACGATAGAC
GGCGAAACTG CCCGGGATTT CGACGACGCC GTATATTGCG AGCGTGACGG AAAGGATTAC
AAGCTTTATG TCGCCATCGC CGACGTCAGC CATTATGTAA AGCCGGGCGA CGCTCTCGAT
CAGGAGGCAT ACAATCGTGG AAATTCCGTC TATTTTCCGC GGCGGGTTAT CCCCATGCTG
CCGGAAGCGC TATCGAACGG GCTCTGTTCT CTCAACCCGG AGGTAGATCG CTTATCCATG
GTGTGCGAAA TAAGCCTGGA TTTTGCAGGT GACTTCAAGG GCTATCGTTT TTATCCCGCA
GTCATGTTTT CTCACGCCCG GCTTACCTAT ACAAAAGTGG CGGCCATGCT GGAGAATTCT
AAGGGAGAGG AAGCGAAACA ATATAAGGAT CTCTTGCCGC ACATCCAGTT GCTCTACAAA
TTATTCAAGG TATTGCTGAA AGCGCGAAAT CTGCGGGGGG CAATTGATTT TGAAACGATC
GAAACGCGCA TGATCTTCAA CGATGAGGGC AAAATCGAGC GCATCCTGCC GATACAACGT
AACGACGCGC ATCGCATCAT CGAAGAATGC ATGCTCGCCG CCAATGTATG TGCCTCCGAT
TTTCTGCAGA AACACAAGCA GGCGACTCTC TATCGGGTCC ATGAAGGTCC GACGCCGGAA
AAACTGGCCG CTCTGCGTGA TTTTCTCAAG GAATTCGGTG TTCAGTTAGG TGGGGGGGAT
AACCCCAGGG CGAAAGATTA CGCTCGTACG TTATCTACAA TAAAGGATCG GCCCGATGCG
CAGCTGTTGC AGACCGTGAT GCTTCGATCC TTGCGCCAGG CAGTGTACAG TCCCGACAAC
GTTGGCCATT TCGGCCTGGC CTATGAATCC TATACACACT TTACATCCCC CATCAGGCGT
TATCCCGATC TCCTCGTCCA TCGAGCCATC AAGGCTGTCC TGAACAAGGC AGCATACTCT
CCCGGCAACT GGCACGAACT GGGCGAGCAT TGTTCGCAGA CGGAGCGCCG CGCGGACGAG
GCCACGCGCG ATGTCGAAGC GTGGCTCAAG TGCTATTACA TGCAGGACAG AATCGGAGAA
TGCTTTGAGG GAGTCGTCAG TGGGGTCGCC GGTTTTGGTC TTTTTGTGGC GCTGGACGGA
ATTTATGTCG AGGGACTCGT GCATGTTTCA GAACTGCCCA GCGATTATTT CCATTTTGAC
GCGGTCAGGC ATATGTTGCT GGGGGAGCGC ACGGGGAAGC GCTACCGCCT GGGTGACCGG
CTCAGAGTCA GGCTGGTTCG AGTCGATCTG GAATCCAGCA AGATAGATTT CGTGCTCGCT
GAAAATGCCC AGGATGCGGG GAAAATAAAA ACCGAGGCAG TGAGTTGA
 
Protein sequence
MTIKKKQKLR KLDPYLEREK EHYGHALPSR EFILQILEEQ GVPVPEEALQ NLLGITEEEG 
EIFSRRLSAM LREGQIMRNR KGDICMVEKL ALIKGKVQGH PDEFGFLIPD DGSPDLFLSA
KEMRKALHGD RVMVREIGVD RRGRREGAIV EVLERAVTQL VGRLHADHGI LYVEAENRRI
SQDILIPREE SMNARAGQVV IVEILQQPSK HAQPIGRIIE ILGDYTAPGM EIEIALRKHD
LPYQFPQEVE KLSARLPSKV LKKDLIKRED LRHLPLVTID GETARDFDDA VYCERDGKDY
KLYVAIADVS HYVKPGDALD QEAYNRGNSV YFPRRVIPML PEALSNGLCS LNPEVDRLSM
VCEISLDFAG DFKGYRFYPA VMFSHARLTY TKVAAMLENS KGEEAKQYKD LLPHIQLLYK
LFKVLLKARN LRGAIDFETI ETRMIFNDEG KIERILPIQR NDAHRIIEEC MLAANVCASD
FLQKHKQATL YRVHEGPTPE KLAALRDFLK EFGVQLGGGD NPRAKDYART LSTIKDRPDA
QLLQTVMLRS LRQAVYSPDN VGHFGLAYES YTHFTSPIRR YPDLLVHRAI KAVLNKAAYS
PGNWHELGEH CSQTERRADE ATRDVEAWLK CYYMQDRIGE CFEGVVSGVA GFGLFVALDG
IYVEGLVHVS ELPSDYFHFD AVRHMLLGER TGKRYRLGDR LRVRLVRVDL ESSKIDFVLA
ENAQDAGKIK TEAVS