Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmul_A1953 |
Symbol | |
ID | 3785130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosospira multiformis ATCC 25196 |
Kingdom | Bacteria |
Replicon accession | NC_007614 |
Strand | - |
Start bp | 2242655 |
End bp | 2244862 |
Gene Length | 2208 bp |
Protein Length | 735 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637812040 |
Product | VacB/RNase II family 3'-5' exoribonuclease |
Protein accession | YP_412640 |
Protein GI | 82703074 |
COG category | [K] Transcription |
COG ID | [COG0557] Exoribonuclease R |
TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases [TIGR02063] ribonuclease R |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.223171 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACAATCA AGAAGAAACA AAAGCTCCGC AAGCTTGACC CTTATCTTGA ACGGGAAAAA GAGCATTATG GGCATGCGCT GCCTAGCCGG GAATTCATAC TCCAGATACT CGAAGAGCAA GGCGTTCCCG TACCCGAGGA AGCATTGCAG AACCTGCTCG GAATCACCGA AGAAGAAGGC GAGATCTTCA GCCGCCGTCT TTCTGCCATG TTGCGCGAAG GCCAGATCAT GCGCAACCGG AAGGGCGATA TCTGCATGGT GGAGAAGCTC GCTCTTATCA AAGGCAAGGT TCAGGGTCAC CCGGATGAAT TTGGTTTTCT GATACCTGAC GATGGCAGTC CCGATTTGTT TTTGAGTGCC AAAGAAATGC GCAAGGCGCT GCATGGCGAC CGCGTGATGG TGCGTGAAAT CGGGGTTGAC CGGCGAGGCC GCCGGGAGGG AGCCATCGTA GAGGTGCTGG AGCGCGCAGT AACGCAGTTG GTGGGACGAT TACATGCGGA TCACGGAATT CTTTACGTGG AGGCGGAGAA TAGACGTATC AGCCAGGACA TTCTGATTCC CCGAGAAGAA TCGATGAATG CAAGGGCAGG CCAGGTGGTC ATCGTGGAAA TCCTCCAGCA GCCGAGTAAA CATGCCCAGC CTATTGGGCG CATCATCGAG ATTTTGGGCG ACTACACGGC CCCCGGAATG GAGATCGAAA TCGCGCTTCG CAAGCACGAC TTGCCTTACC AGTTTCCACA GGAAGTGGAA AAACTTTCGG CACGTCTTCC ATCCAAGGTG TTAAAAAAAG ACCTGATCAA GAGAGAAGAC CTTCGTCACC TTCCGCTGGT GACGATAGAC GGCGAAACTG CCCGGGATTT CGACGACGCC GTATATTGCG AGCGTGACGG AAAGGATTAC AAGCTTTATG TCGCCATCGC CGACGTCAGC CATTATGTAA AGCCGGGCGA CGCTCTCGAT CAGGAGGCAT ACAATCGTGG AAATTCCGTC TATTTTCCGC GGCGGGTTAT CCCCATGCTG CCGGAAGCGC TATCGAACGG GCTCTGTTCT CTCAACCCGG AGGTAGATCG CTTATCCATG GTGTGCGAAA TAAGCCTGGA TTTTGCAGGT GACTTCAAGG GCTATCGTTT TTATCCCGCA GTCATGTTTT CTCACGCCCG GCTTACCTAT ACAAAAGTGG CGGCCATGCT GGAGAATTCT AAGGGAGAGG AAGCGAAACA ATATAAGGAT CTCTTGCCGC ACATCCAGTT GCTCTACAAA TTATTCAAGG TATTGCTGAA AGCGCGAAAT CTGCGGGGGG CAATTGATTT TGAAACGATC GAAACGCGCA TGATCTTCAA CGATGAGGGC AAAATCGAGC GCATCCTGCC GATACAACGT AACGACGCGC ATCGCATCAT CGAAGAATGC ATGCTCGCCG CCAATGTATG TGCCTCCGAT TTTCTGCAGA AACACAAGCA GGCGACTCTC TATCGGGTCC ATGAAGGTCC GACGCCGGAA AAACTGGCCG CTCTGCGTGA TTTTCTCAAG GAATTCGGTG TTCAGTTAGG TGGGGGGGAT AACCCCAGGG CGAAAGATTA CGCTCGTACG TTATCTACAA TAAAGGATCG GCCCGATGCG CAGCTGTTGC AGACCGTGAT GCTTCGATCC TTGCGCCAGG CAGTGTACAG TCCCGACAAC GTTGGCCATT TCGGCCTGGC CTATGAATCC TATACACACT TTACATCCCC CATCAGGCGT TATCCCGATC TCCTCGTCCA TCGAGCCATC AAGGCTGTCC TGAACAAGGC AGCATACTCT CCCGGCAACT GGCACGAACT GGGCGAGCAT TGTTCGCAGA CGGAGCGCCG CGCGGACGAG GCCACGCGCG ATGTCGAAGC GTGGCTCAAG TGCTATTACA TGCAGGACAG AATCGGAGAA TGCTTTGAGG GAGTCGTCAG TGGGGTCGCC GGTTTTGGTC TTTTTGTGGC GCTGGACGGA ATTTATGTCG AGGGACTCGT GCATGTTTCA GAACTGCCCA GCGATTATTT CCATTTTGAC GCGGTCAGGC ATATGTTGCT GGGGGAGCGC ACGGGGAAGC GCTACCGCCT GGGTGACCGG CTCAGAGTCA GGCTGGTTCG AGTCGATCTG GAATCCAGCA AGATAGATTT CGTGCTCGCT GAAAATGCCC AGGATGCGGG GAAAATAAAA ACCGAGGCAG TGAGTTGA
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Protein sequence | MTIKKKQKLR KLDPYLEREK EHYGHALPSR EFILQILEEQ GVPVPEEALQ NLLGITEEEG EIFSRRLSAM LREGQIMRNR KGDICMVEKL ALIKGKVQGH PDEFGFLIPD DGSPDLFLSA KEMRKALHGD RVMVREIGVD RRGRREGAIV EVLERAVTQL VGRLHADHGI LYVEAENRRI SQDILIPREE SMNARAGQVV IVEILQQPSK HAQPIGRIIE ILGDYTAPGM EIEIALRKHD LPYQFPQEVE KLSARLPSKV LKKDLIKRED LRHLPLVTID GETARDFDDA VYCERDGKDY KLYVAIADVS HYVKPGDALD QEAYNRGNSV YFPRRVIPML PEALSNGLCS LNPEVDRLSM VCEISLDFAG DFKGYRFYPA VMFSHARLTY TKVAAMLENS KGEEAKQYKD LLPHIQLLYK LFKVLLKARN LRGAIDFETI ETRMIFNDEG KIERILPIQR NDAHRIIEEC MLAANVCASD FLQKHKQATL YRVHEGPTPE KLAALRDFLK EFGVQLGGGD NPRAKDYART LSTIKDRPDA QLLQTVMLRS LRQAVYSPDN VGHFGLAYES YTHFTSPIRR YPDLLVHRAI KAVLNKAAYS PGNWHELGEH CSQTERRADE ATRDVEAWLK CYYMQDRIGE CFEGVVSGVA GFGLFVALDG IYVEGLVHVS ELPSDYFHFD AVRHMLLGER TGKRYRLGDR LRVRLVRVDL ESSKIDFVLA ENAQDAGKIK TEAVS
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