| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A1914 |
|---|
| Symbol | |
|---|
| ID | 3784152 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosospira multiformis ATCC 25196 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007614 |
|---|
| Strand | - |
|---|
| Start bp | 2204065 |
|---|
| End bp | 2205120 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637812000 |
|---|
| Product | tRNA pseudouridine synthase A |
|---|
| Protein accession | YP_412601 |
|---|
| Protein GI | 82703035 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0101] Pseudouridylate synthase |
|---|
| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTGTG CGAAAGCGGT GGGCAATGAC GGACTACCCA ATCAGCGCCC AATGTCACGC
TGGAGAGCGT CTGCTTATAC GTCATTACTT CCGTTTCCCG AAAAGTGTTT AAAAATTCCC
TGGACGTGCC GGTACAAGTA TCACCAGAAT CACGATGGTA GCTTTACCGT GAGAATCGCA
ATGGTGCTGG AGTATGACGG CAGCAATTTC TGCGGCTGGC AAAGCCAGCC AGGGGGAAAT
ACCGTGCAGG ATGCCGTGGA AGCGGCCTTG TCTGAAATTG CAGGCGAGGC TATCCGAGTA
GTGACGGCAG GGAGAACCGA CGCAGGGGTT CATGCGATCT ACCAGGTGCT GCATTTCGAT
ACTCGGGCGG AGCGACCTAT GAATGCATGG GTGCGGGGTG CAAACGCCCT GCTGCCCAGC
GGCATTGCCC TGCTATGGGC ATCCCCTACT GCAGACGATT TTCATGCCCG CTACTGTGCG
CTTGAGCGTT GTTACCTCTA CCTGTTACTG AACCACCCAG TGCGGCCGGG CCTTCATCAG
CACCGAGTCG GCTGGTATCA CCATCCGCTC CGTCTCGAAT CCATGCAGAT GGGGGCACAA
ATGCTGGTGG GCGAACACGA TTTCAGCGCC TTTCGGGCTG CTGCATGCCA GGCCAAATCC
CCTGTACGCA CCCTGACAAA ACTGGAAGTT ACGCGAGTGG GAAACATGGT TGCGTTTGAG
CTGCGCGCTA ATGCATTTTT GCACCACATG GTACGGAATA TCGTCGGTTG TCTGGTCTAT
GTAGGTAAAG GTAAATTTCG TCCTGACTGG ATAGGGAAAC TGCTTGAAAA CGGGAAGCGC
AGCGAAGCTG CACCGACTTT TTCCGCTTCC GGGTTATACT TGGCAGGGGT TGCCTATGAT
GCGAGGTGGA AGCTGCCACC CTTTGTCGAG CCCCCTCTGA CCGCAATAGT GCCGGGCACA
AACAGGCCGG CTATCCTCAC ATCATGGGCG ACAAGTGGCG GAAACCCAGT TGCGGGCGCA
ACACCGGAAG TCAGGGATAT ATGTCGATTC GAGTAA
|
|---|
| Protein sequence | MACAKAVGND GLPNQRPMSR WRASAYTSLL PFPEKCLKIP WTCRYKYHQN HDGSFTVRIA
MVLEYDGSNF CGWQSQPGGN TVQDAVEAAL SEIAGEAIRV VTAGRTDAGV HAIYQVLHFD
TRAERPMNAW VRGANALLPS GIALLWASPT ADDFHARYCA LERCYLYLLL NHPVRPGLHQ
HRVGWYHHPL RLESMQMGAQ MLVGEHDFSA FRAAACQAKS PVRTLTKLEV TRVGNMVAFE
LRANAFLHHM VRNIVGCLVY VGKGKFRPDW IGKLLENGKR SEAAPTFSAS GLYLAGVAYD
ARWKLPPFVE PPLTAIVPGT NRPAILTSWA TSGGNPVAGA TPEVRDICRF E
|
|---|
| |