| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A1749 |
|---|
| Symbol | |
|---|
| ID | 3786051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosospira multiformis ATCC 25196 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007614 |
|---|
| Strand | + |
|---|
| Start bp | 2001686 |
|---|
| End bp | 2003107 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637811835 |
|---|
| Product | peptidase S1C, Do |
|---|
| Protein accession | YP_412438 |
|---|
| Protein GI | 82702872 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
|---|
| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGCTA AATTTTTACT GGTGGTGCTG CTTGGATTAT CCACGAGCGT GTTTGCCCAG
GCGCCGGCGC GTGAATTGCC GGATTTTACC GGGTTGGTGG AAAGAGAAGG ACCCTCGGTC
GTAAACATCA GCACCGTTCA GTCAGGCAAC TCAACCACGG AACGGGCTTT TCCGGGAATA
CCGAACATAC CCGAGGATGA TCCGTTTTTC GAGTTTTTCC GGAGACACAT GCAGCCGCAT
GGAGGAATGC CACGAGATTT CGAATCCAGA TCGGTAGGCT CCGGCTTTAT TATCAGTTCG
GATGGCTATA TTCTGACAAA TACCCATCTG GTGGATGGAG CCGATGAAAT CAATGTGAAG
CTTACGGACA AACGGGAGTT CCGGGCAAAG CTCATCGGCG CGGATCGCAA GACGGATATT
GCTCTCCTCA AGATCGATGC TACCGGACTG CCGAAAGTCA CCCAGGGGGA TCCCAATAAC
ATGAAGGTAG GAGAATGGGT GGTAGCGATC GGATCACCGT TCGGCTTTGA AAACAGCGTC
ACTGCCGGAA TTGTCAGCGC CAAAGGACGC TCTCTGGCAC AGGAGAATTT CGTGCCCTTC
ATCCAGACGG ATGTCGCGAT CAACCCCGGG AATTCCGGCG GACCGCTATT CAATATGAAC
GGTGAGGTGG TCGGTGTCAA TTCCCAGATC TACAGTCGCA CGGGTGGATT CATGGGTTTG
TCATTCGCCA TTCCCATCGA TGTTGCCCGG GATATATCGA ATCAGTTGAT TGCGAGCGGC
AAGGTAAGCC GAGGCAGAAT CGGCGTGCTG ATTCAGGAAA TCACAAAGGA ACTGGCGGAA
TCGTTCGGTT TACCCAAGCC AGCCGGCGCG CTGGTAGCTT CTGTCCAGAA AGGCGGCCCG
GCAGACAAGG CAGGCATTCA AGCACGGGAT GTCATTCTCA AGTTCGACGG CAAGACCGTG
AATTCCTCGG GCGATCTGCC ACGCATAGTA GGCTCGACCA AGCCAGGCAC GAAAGTGCAG
ATGCAGGTGT GGCGAAATGG GTCGACCAAG GAGTTCACGA TTACAGTGGA TGAGCTTCCG
GAGGATGAAA AACCGGCAGC GCGTTCTGGA AAGCGGGGCA AGACGCCGGA TACAGCGAAT
CGCATCGGCT TGAGCCTGAT CGAGTTGACT CCCGATCAGA AGAAGGAACT GGAAACTGAA
AGCGGGCTTC TGGTCGAGGA CATGGTGCCT GGTATCGCGA GTCGCGCGGG GGTCAGACCC
GGTGATGTCA TTCTGAGCAT CAATAATCAG GATGTCAAAA CGGTTGATCA ATTCAACCAG
TTGCTCAACA AGGTCGAGAA AGGACGCAAT ATCGCCCTGC TGGTCAAACG CGGTGATACA
GCCACCTTCA TTACCATGAA GATGAATGGT GAACACAGAT AA
|
|---|
| Protein sequence | MIAKFLLVVL LGLSTSVFAQ APARELPDFT GLVEREGPSV VNISTVQSGN STTERAFPGI
PNIPEDDPFF EFFRRHMQPH GGMPRDFESR SVGSGFIISS DGYILTNTHL VDGADEINVK
LTDKREFRAK LIGADRKTDI ALLKIDATGL PKVTQGDPNN MKVGEWVVAI GSPFGFENSV
TAGIVSAKGR SLAQENFVPF IQTDVAINPG NSGGPLFNMN GEVVGVNSQI YSRTGGFMGL
SFAIPIDVAR DISNQLIASG KVSRGRIGVL IQEITKELAE SFGLPKPAGA LVASVQKGGP
ADKAGIQARD VILKFDGKTV NSSGDLPRIV GSTKPGTKVQ MQVWRNGSTK EFTITVDELP
EDEKPAARSG KRGKTPDTAN RIGLSLIELT PDQKKELETE SGLLVEDMVP GIASRAGVRP
GDVILSINNQ DVKTVDQFNQ LLNKVEKGRN IALLVKRGDT ATFITMKMNG EHR
|
|---|
| |