Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmul_A1709 |
Symbol | |
ID | 3784808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosospira multiformis ATCC 25196 |
Kingdom | Bacteria |
Replicon accession | NC_007614 |
Strand | + |
Start bp | 1949725 |
End bp | 1953054 |
Gene Length | 3330 bp |
Protein Length | 1109 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637811796 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_412399 |
Protein GI | 82702833 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0904197 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCGTT CTCCCTGGCT TATCGTCTTG CTTTACGTCG CTTTATCGAC CCTCTGGATG GCCGTTGCGG GCTATCTGAT ATCACTCATG CTTGAGGATC CGGCTTTGCG GAGCCGCGCC TATCTGGCAA AGGAACTGGT TCTTATTGCC ATTAGCAGTA TCCTATTCTA TGCATTGCTT AAACTGGGCA AGGGCGCTAC TACTGCCCGC GAAGCCGATG TGACAGCGGC AGACGTCGCA GCTTCGGCTG CGGCAGGTTT CCGGCTGAAC CGGTTGATGT TGGCGTTCTT CTCGCTGGCG ATGATGGCAC CCATTATCAG CATAATGATT ATAAAGATGT ATGGTCCGGA GATAGAGCAA GGGGCCTATG CTGATCTGCA AACCATCGTG GATCTTAAGG CCGAGCAGAT CGAACTCTGG CTTGCTGAAC GGCATAACGA CGCGGAGGCA TTGCTGGCGA ACCAGGCGCT TATCGAGCAA GTAGTCGATC TCAAACGAAG AAGAAACGCG CATGAACTGG AGCTTATCCG TAATCGCCTG GAGGCAGTGC GGCAAGCCTA CAGCTACGAG TCAGTGATAT TGCTTGATGT CGAAAGCCGG CCTCTGCTCG TGTTAGGCGA AAAGCATGAA TTGCCACCCA TTACCCGCGA ATTACTATCT ACCGCGTTAC GTTCGCGCCA GATACAGAGT ACCGATTTCT TTCTGGATGA AAACGGAAAA CCTCTGCTGG ATATTGCAGT GCCTCTGGTA GCGGAGACAA CAAATAAGGA ACCTGGTGCC ATTGTGCTCT TACGAGCGGA TCTGGAGCAA TTCCTTCTTC CACTCGTCGA GAAGTGGCCC CGTATCAGTT GCAGCGGAGA GATACTGCTT ATCACCCAGA AGAATGAAAC CGTCAATTAT CTTAATAAAT TGCACCGCTT TCAGCGGACA CATGGCACAC ATGGATATCA TGCGCTCGCC AGGGACGAAC TTGCTAGCGC CATTGCCACC CGGGACGAAA AACAGGGGAC GGTACATGGA ATCGATTACC GGGGAGAGCA GGTGCTCGCG GCCTATCGAC CCCTTACCGG GACCGGTTGG CGTTTGCTTG CAAAAATCGA CCAGAATGAA GTGCTGGCGC AGCTATGGAC TCTTGTATTC TGGATGAGTG CCGTCATTCT CATTGCGGTT ACTGCGGTAA GCGTCGTGCT GCTGCTGTTA TGGCGTCAAC AGCAACGCGC CCACCAGCTG GCACTGATCA TTCACACCGC GGATCAGGAT CGCCTTCTCA AGTATTTCTA TGACCTGCCA TTCATCGGCA TGGCGATTAC CTCCCCCGAT ACCAAACGCT GGTTGCGCTT CAATAATCAG TTTTGCGAGA TGATGGGATA CTCAACTGAG GAGTTGGCAA AAAAAAGCTG GATTGAGATA ACTCATCCGG ATGATGTCGC TAAAAGTACT GCCGAGCGCG AGCGCATCCT GAAAGGGGAG TCTGAAGGCT ACGCGATGAA CAAGCGCTTC ATCCGTAAGG ATGGCTCGAT AATCTTCGCC AATGTGGATG TCAAATGTGT CCGCAGGGAT GATGGCACGG TGCATTATTT TGTTGCCATG ATCCGGGATA TTACCGAGCA AGAACGCCGG AAAACCGAGA TTCTGGCAGC GCGACGCCAG CTCCAGGCCA CGCTCGACGC CATTCCCGAT TTACTGTTCG AGCTTGATGC AGACGGTTGT GTACACGCGT GGCATTCGGT CCGGCGTACC GAGTTTCCGA CTGTGTCCGG TGAAAGCCTT GTAGGCAAAA AGGTCGCGGA TTTTCTCCCC ACCGGAGCAG TAGATATTAT CCTGTCGGCA TTGGCGGAGG CACAGGAGAA AGGGCTCTCC TCGGGGAAAC AATTGGAACT TCGCCTTCCC GGCCGGGAAG ACAAATGGTG GTTCGAGCTT TCCGTCTCGC GCAAGCATGT CGATTCCGCA GCGGGCCTTC GTTTTATCGT TCTTGCGCGT GATATTACGG AACGCAAGGC GTCAGAACAA AGAATACTGC ATCTGGCGCA TTACGATTCG CTCACCGGCC TGCCAAACCG CGCTCTGCTG GCGGACCGGA TGAGAGTGGC CATCAATCGT GCAGCGCGGC AAGCCAAACG CCTCGCTGTA CTGTTCGTGG ACCTCGATCG TTTCAAGGCA ATCAATGATT CGCTTGGTCA TGACGTTGGC GACCACCTTC TCAAGGTTGT GGCCGAGCGG ATGCAAACCT CGATACGCAG CGTAGATACG GTAAGCCGGG TGGGAGGTGA CGAATTTGTT GTGCTGCTGA ACGAAATTGA AACCGCGGAG GATGCAGCTC GTGTGGCGCA AAAAATCATA GATGGTCTTT CACAACCGTA CCAGATCGAA AAACATGAAC TGCTGCTGAC CGGAAGCATT GGCATTTGCA TCTATCCCGA TAACGGCAAG GAACCGAATA TCCTCCTGCG CAATGCGGAT GCGTCCATGT ATACAGCAAA GGAAGCTGGA CACAACCGTT ACCAGTTCTA CTCAGAAGAC ATGACAGCGC GGGCGATCGA GCGACTCAGT CTGGAACATG ATCTCCGGGG GGCGGTCGAA CGCGGTGAAA TGTTCCTGGT TTATCAGCCC CAGATCGAGC TTGGGACAAG CCGCGTTATC GGGGTGGAGG TGCTGATGCG CTGGCGTCAT CCCGCCCGTG GATTGATTTC CCCTGTTCGC TTTATTCCCG TTGCCGAGGA TACGGGACTG ATTCTCTCGA TCGGTGAATG GGGTTTGCGC GAATCGTGCA GGCAGGCGCA GCTATGGTAC GAACGTGGAC TGCTGAATGC GTGTATCTCG GTCAATGTTT CGGCAGTGCA ATTCCGTCAG ACTGATTTTG TCGGAATCAT TGAAAATGCA CTTCAGGAGT CCGGTCTGGC GCCCACTAAC CTGGAACTGG AACTTACTGA AAGCGCAGTG ATGCAAGGGG CGGAACCTGC ACTGAACAAG CTGCGCGAAC TGGATGCGCT TGGGGTGAAA GTCGCCATCG ACGATTTTGG CACAGGTTAC TCAAGTCTCG CCTATTTACG GCAGTTTACG GTTGACCGCC TGAAAATCGA TCAATCATTC GTACGGGACG TGCCGGGGAA CAATGATGCC GAAGCCATTG CAGCGGCAAT CGTGGCAATG GGTCTCAACC TGGGCTTCCG TATCATTGCC GAAGGCGTAG AAACGGAAGC GCAAGCGGAA TTTCTCCAAA GTGTCTTATG CAAGGAAGGC CAGGGTTATC TTTTTGCGTG GCCTATGACT GCTATTGAGT TCGAGGCATG GATAGCCGGA TGGCAAAACC GCGCAGGAAG CACGTCCTAG
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Protein sequence | MSRSPWLIVL LYVALSTLWM AVAGYLISLM LEDPALRSRA YLAKELVLIA ISSILFYALL KLGKGATTAR EADVTAADVA ASAAAGFRLN RLMLAFFSLA MMAPIISIMI IKMYGPEIEQ GAYADLQTIV DLKAEQIELW LAERHNDAEA LLANQALIEQ VVDLKRRRNA HELELIRNRL EAVRQAYSYE SVILLDVESR PLLVLGEKHE LPPITRELLS TALRSRQIQS TDFFLDENGK PLLDIAVPLV AETTNKEPGA IVLLRADLEQ FLLPLVEKWP RISCSGEILL ITQKNETVNY LNKLHRFQRT HGTHGYHALA RDELASAIAT RDEKQGTVHG IDYRGEQVLA AYRPLTGTGW RLLAKIDQNE VLAQLWTLVF WMSAVILIAV TAVSVVLLLL WRQQQRAHQL ALIIHTADQD RLLKYFYDLP FIGMAITSPD TKRWLRFNNQ FCEMMGYSTE ELAKKSWIEI THPDDVAKST AERERILKGE SEGYAMNKRF IRKDGSIIFA NVDVKCVRRD DGTVHYFVAM IRDITEQERR KTEILAARRQ LQATLDAIPD LLFELDADGC VHAWHSVRRT EFPTVSGESL VGKKVADFLP TGAVDIILSA LAEAQEKGLS SGKQLELRLP GREDKWWFEL SVSRKHVDSA AGLRFIVLAR DITERKASEQ RILHLAHYDS LTGLPNRALL ADRMRVAINR AARQAKRLAV LFVDLDRFKA INDSLGHDVG DHLLKVVAER MQTSIRSVDT VSRVGGDEFV VLLNEIETAE DAARVAQKII DGLSQPYQIE KHELLLTGSI GICIYPDNGK EPNILLRNAD ASMYTAKEAG HNRYQFYSED MTARAIERLS LEHDLRGAVE RGEMFLVYQP QIELGTSRVI GVEVLMRWRH PARGLISPVR FIPVAEDTGL ILSIGEWGLR ESCRQAQLWY ERGLLNACIS VNVSAVQFRQ TDFVGIIENA LQESGLAPTN LELELTESAV MQGAEPALNK LRELDALGVK VAIDDFGTGY SSLAYLRQFT VDRLKIDQSF VRDVPGNNDA EAIAAAIVAM GLNLGFRIIA EGVETEAQAE FLQSVLCKEG QGYLFAWPMT AIEFEAWIAG WQNRAGSTS
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