| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A1585 |
|---|
| Symbol | |
|---|
| ID | 3784465 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosospira multiformis ATCC 25196 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007614 |
|---|
| Strand | - |
|---|
| Start bp | 1817278 |
|---|
| End bp | 1819650 |
|---|
| Gene Length | 2373 bp |
|---|
| Protein Length | 790 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637811671 |
|---|
| Product | RNA binding S1 |
|---|
| Protein accession | YP_412278 |
|---|
| Protein GI | 82702712 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2183] Transcriptional accessory protein |
|---|
| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCCAT CCATTGAACA ACGTCTTTCC CTTGAACTCG GCGCGAAGCC TGCACAGGTT
AACGCGGCCA TTGCCTTGCT CGATGAAGGT GCCACCGTGC CCTTTATTGC ACGTTACCGC
AAGGAGGTGA CTGGCGGGCT GGACGATGCG CAGTTGCGCC TGCTGGAAGA ACGGTTGCGT
TATCTGCGTG AACTGGAAGA CAGGCGCGCC GCGATTATCG CCTCGATAGA AGAGCAGGGG
AAAATGACGC CCGCGCTGCT TGCTTCCATC CTGCAGGCCG AGGATAAGAC ACGGCTGGAA
GATCTGTATC TCCCCTTCAA GAAAAAGCGG CGCACCAAGG CGCAGATCGC GCTCGAAGCG
GGGCTGGAGC CACTGGCAGA TGCGCTGCTT GCCGATCCGA CGCTACAACC CGAGGAAGAG
GCCATCAAGT ACTTGAAGCC GCCCTTCGCT ACCGAGCAGG GGGATAATCC CGGGGTACCG
GATGTGAAAG CTGCGCTCGA GGGAGCACGC CAGATACTGA TGGAGCGTTT CGCGGAGGAT
GCCGAGTTGC TTCAGTGGCT GCGCGAGTAC CTGCTGGACC ATGGGGTGGT GGAGTCGAAA
GTCGCGAGCG ACAAGAATGG CGGTAAGGGT AAGGAAGAGG AGGGCGCCAA ATATTCCGAT
TATTTCGATT ACTCCGAACC GCTCAGCGCT ATTCCTTCGC ACCGGGCGCT GGCGCTTTTT
CGGGGGCGAC GTGAAGAAAT TTTACGCGTT GCCCTGCGTC TGGATTCGGA GGCGGAGAAA
CCGAAGTGGG ATGCACCGCA TAACCCGTGC GAGGCGCGCA TTGCTGTCCG GTTCGGTATT
GCGGACAAAG GGCGGCCTGC CGATGCGTGG CTGATGGACA CGGTGCGCTG GACCTGGCGG
GTGAAGAGTT TTCCGCATCT GGAACTCGAT CTTATGGGTT CGTTGCGCAC ACGCGCCGAG
ACCGAAGCGA TCCAGGTCTT TGCGCGCAAC CTGAAAGCCC TGCTCATGGC CGCTCCCGCC
GGGCCTCGCG TGACAATAGG TCTAGACCCC GGCTTGCGCA CAGGGGTGAA AGTCGCAGTA
GTGGATGCGA CAGGGCGGGT CATGGAAACG GCCACCATTT ATCCACATCA ACCAAGGAAT
GATTGGGAGG GGTCCCTTCA TGTTCTCGGC ACGCTTGCGG AAAAATTTCG GGTATCGCTG
ATAGCCATAG GCAATGGCAC CGCTTCGCGC GAGACCGACA AGCTGGCAAA AGACCTGATC
AAGCGCCGGC CCGATCTCAA GCTCACCTCT ATCGTGGTTT CGGAAGCGGG GGCTTCGGTT
TATTCCGCCT CCGATCTGGC CTCCAGAGAG TTCCCCGATA TGGATGTGTC GCTGAGAGGA
GCGGTTTCCA TTGCGCGGCG CCTGCAGGAC CCTCTGGCGG AGCTGGTCAA AGTCGATCCG
AAATCGATTG GCGTAGGCCA ATACCAGCAT GATGTCGGGC AAACCCAGCT CGCGCGCTCG
CTCGATGCCG TGGTCGAAGA CTGCGTCAAT GCGGTAGGCG TGGACGTCAA TACGGCCTCC
GCGCCGCTGC TCGAACGCGT TTCGGGGCTT AACCCGGCTG TCGCACAAAG CATCGTTGTC
TATCGCGAGG AAAACGGGAT GTTTGCCTCG CGTGAAGCTC TGCACCAGGT GCCGCGCCTG
GGTGAGAAAA CCTTCGAGCA GGCGGCAGGC TTCTTGCGGG TGATGCATGG CGAGAACCCG
CTTGATGCGT CGGCAGTGCA TCCCGAGTCG TATCCCGTCG TGCAAAGAAT CCTTTCCGAC
TTGAAGCAGG AAATCAGGTC GATCATCGGC AATAACAAAT TATTGAAGTC GCTCAATCCG
GCGAGGTATG CGGATGATCG ATTCGGCGTG CCGACCGTCA CCGACATCGT GAAGGAGCTG
GAAAAGCCGG GCCGTGATCC CCGGCCGGAA TTCATCACTG CCGCATTCAA GGAAGGCGTG
AACGAGATTT CCGATCTGCA GCCGGGTATG CTGCTGGAAG GCGTGGTAAC CAACGTGGCT
GCCTTCGGCG CGTTCGTCGA TATCGGGGTG CATCAGGATG GGCTGGTGCA CATCTCCGCG
CTCGCCGACA AATTCGTCAA AGACCCGCAC ACGGTCGTCA AGGTGGGGCA GGTGGTGAAG
GTCAAAGTGC TGGAAGTCGA TGAAAAGCGT AAGCGCATTG CCCTTACGAT GAGGTTGGCA
GATGCGCCAG CACCACAGAC ACAGGAGGCG CGAGGGGCTG GCAAGCGTGA GCAGCCAAGG
AATAGGAAGG ACCGCTCAGC CAAACCCCAG CAGAAACAGG ATTCCAGGGC TGATACGGCG
ATGGCAGCAG CGTTTGCGAG ATTGAAGGGT TGA
|
|---|
| Protein sequence | MLPSIEQRLS LELGAKPAQV NAAIALLDEG ATVPFIARYR KEVTGGLDDA QLRLLEERLR
YLRELEDRRA AIIASIEEQG KMTPALLASI LQAEDKTRLE DLYLPFKKKR RTKAQIALEA
GLEPLADALL ADPTLQPEEE AIKYLKPPFA TEQGDNPGVP DVKAALEGAR QILMERFAED
AELLQWLREY LLDHGVVESK VASDKNGGKG KEEEGAKYSD YFDYSEPLSA IPSHRALALF
RGRREEILRV ALRLDSEAEK PKWDAPHNPC EARIAVRFGI ADKGRPADAW LMDTVRWTWR
VKSFPHLELD LMGSLRTRAE TEAIQVFARN LKALLMAAPA GPRVTIGLDP GLRTGVKVAV
VDATGRVMET ATIYPHQPRN DWEGSLHVLG TLAEKFRVSL IAIGNGTASR ETDKLAKDLI
KRRPDLKLTS IVVSEAGASV YSASDLASRE FPDMDVSLRG AVSIARRLQD PLAELVKVDP
KSIGVGQYQH DVGQTQLARS LDAVVEDCVN AVGVDVNTAS APLLERVSGL NPAVAQSIVV
YREENGMFAS REALHQVPRL GEKTFEQAAG FLRVMHGENP LDASAVHPES YPVVQRILSD
LKQEIRSIIG NNKLLKSLNP ARYADDRFGV PTVTDIVKEL EKPGRDPRPE FITAAFKEGV
NEISDLQPGM LLEGVVTNVA AFGAFVDIGV HQDGLVHISA LADKFVKDPH TVVKVGQVVK
VKVLEVDEKR KRIALTMRLA DAPAPQTQEA RGAGKREQPR NRKDRSAKPQ QKQDSRADTA
MAAAFARLKG
|
|---|
| |