| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A1407 |
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| Symbol | |
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| ID | 3786437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosospira multiformis ATCC 25196 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007614 |
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| Strand | - |
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| Start bp | 1614147 |
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| End bp | 1615769 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637811495 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_412102 |
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| Protein GI | 82702536 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[S] Function unknown |
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| COG ID | [COG0845] Membrane-fusion protein
[COG5569] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGCTTG GTGTCAAATT AACAGCTTTT GTTGCCCTGG CTGCAATCTT GTTTGTCGCC
GGCTATTGGT GGGGCGCAAT CCGGCCTTCG ACTTCTGCCG CCAAGGCCTC GAGTGTGGTT
TCAGTCGGCG GTAAGCCTGA AAGGAGGATT CTCTATTATC GCAACCCCAT GGGGCTGCCG
GACACTTCGC CGATACCTAA AAAAGATCCC ATGGGCATGG ACTACATACC TGTTTACGAG
GACGAGGAAT CCACTTCCGC CGATGCGGCA GTCAAGATCG GCGTCGAGAG GATACAAAAA
CTGGGAGTAA GAACCGAGCG GGTCGGCATG CGCGAACTCA GCCGCACCGT AAGGGCGGTA
GCGACAGTGC AGGCGGATGA ACGACGGCTC TACGTCGTGG CCCCCAGGTT CGAGGGATGG
ATCGAGCGGC TCCACGTCAA CACGACGGGA CAGATGGTCA GAAAGGGTGA TCCATTGATG
GACGTGTATA GTCCCGACCT GATCACAGCC CAGCATGAAT ATCTTATCGC CCGGAGAGGA
ACAAAGGACG TGGAGGATGG CGGCCTTGAG GTTCGGGCGG GGATGGAACG ACTAGCTGAG
AGTGCCTTGC AGAGACTGCG CAATTGGGAC ATATCCGCGG CCGATCTGAA GACACTCCAG
CAGGAAGGCA AGTTTACACA TTCCGTCATA TTTCGTTCTC CGGCAAGCGG CGTGGTTTTG
GAGAAACGGG CGATTCAGGG ACAGCGCTTC ATGGCGGGAG AGATTTTGTA TCAGATTGCG
GATCTCTCCA GAGTATGGGT GCTCGCAGAC GTGTTTGAGC AGGATCTTGC CACGATACAA
CCGGGGCAGG CTGCCGCCAT TCGGGTTGAG GCCTATCCGG ACAAGGTGTT CCCAGGCGAG
GTGACGTTCA TATACCCCAC GGTCAATCCG GAAACCCGCA CAGCCAAGGT TCGCATGGAG
CTGCCCAATC CACAGGAGTT GCTGAAACCG GCGATGTACG CGAAAGTGGA GTTTGGTTCA
ATCCAACGTA AGGACAGAGT GCTCGCCGTC CCCGAATCGG CCGTACTCGA TGCCGGTACC
AGGCAGTCTG TGCTGGTGGA TCTCGGCGAA GGCCGCTTTG AACCGAGACT CGTGAAGCTG
GGCAAGCACG CGGACGACTA TGTGGAAGTT CTGGGGGGAC TGAAGACTGG GGAAATGATT
GTGGTGAAAG CCAATTTTCT CATAGATGCC GAAAGCAACC TCAAGGCTGC ACTGAGCAGT
TTTACCCGCA GCAGCCAAGC CTCGATGCCT GGTGAAGAGA GGGAGGGAGG CCGGACCGCC
TCTGGCTCAT CCGGAACTGT ACCTTCATCC CCGTCCCCAT CTTCATCGAG CCATCGCGGG
GAAGGCATCA TCGAAGCGAT CGATGTGGCC AATACAACCC TGACTCTTGC CCACCGCCCG
ATCGCAAGCC TCGCCTGGCC GGAGATGTTG ATGGACTTCA AGGTTCTGGA CCCAGCGTTA
CTACGGATGT TGAAACCCGG CCAGAAGGTT GCTTTCGAGA TAACGGAAGC ATCGCCGGGC
GAATACGTTA TTGTGCGTAT ACAGCCCCAG GCCAGCGCTG CCGATCACGG AAAGAAGCCC
TGA
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| Protein sequence | MKLGVKLTAF VALAAILFVA GYWWGAIRPS TSAAKASSVV SVGGKPERRI LYYRNPMGLP
DTSPIPKKDP MGMDYIPVYE DEESTSADAA VKIGVERIQK LGVRTERVGM RELSRTVRAV
ATVQADERRL YVVAPRFEGW IERLHVNTTG QMVRKGDPLM DVYSPDLITA QHEYLIARRG
TKDVEDGGLE VRAGMERLAE SALQRLRNWD ISAADLKTLQ QEGKFTHSVI FRSPASGVVL
EKRAIQGQRF MAGEILYQIA DLSRVWVLAD VFEQDLATIQ PGQAAAIRVE AYPDKVFPGE
VTFIYPTVNP ETRTAKVRME LPNPQELLKP AMYAKVEFGS IQRKDRVLAV PESAVLDAGT
RQSVLVDLGE GRFEPRLVKL GKHADDYVEV LGGLKTGEMI VVKANFLIDA ESNLKAALSS
FTRSSQASMP GEEREGGRTA SGSSGTVPSS PSPSSSSHRG EGIIEAIDVA NTTLTLAHRP
IASLAWPEML MDFKVLDPAL LRMLKPGQKV AFEITEASPG EYVIVRIQPQ ASAADHGKKP
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