Gene Nmul_A1403 details

Gene Information

• Locus tag: Nmul_A1403
• ID: 3786433
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosospira multiformis ATCC 25196
• Kingdom: Bacteria
• Replicon accession: NC_007614
• Strand: -
• Start bp: 1605003
• End bp: 1606880
• Gene Length: 1878 bp
• Protein Length: 625 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637811491
• Product: alpha amylase, catalytic region
• Protein accession: YP_412098
• Protein GI: 82702532
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0296] 1,4-alpha-glucan branching enzyme
• TIGRFAM ID: [TIGR02402] malto-oligosyltrehalose trehalohydrolase

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCTGACAC GACTTCACGA CATGCCTTAT GGCACTCAAA TCACGGACCA CGGAGTGCGC 
TTCCGTCTTT GGGCGCCTGG TTGCAAACAG GTGGGATTGT GCCTTGCAGA CGGACGGACG 
AATGAGAAGC CCGAACGGGC ACTCCCCATG ACTCCCCGCG CAGGAGGATG GTTCGAGTCG 
ACTGTAGCGG AAGCGGGAGC GGGAATACGC TATGGGTTCG ATGTGAACGG TGCCCGCGTG 
CCCGATCCCG CTTCGCGCTT CAATCCGGAT GATGTGCATG GTTTAAGTGA GGTGATCGAT 
CCTTCGGCCT TCGCCTGGCA GGATGCGAAA TGGCGTGGAC GGCCATGGGA AGAAGCCGTC 
ATCTATGAGC TGCATGTAGG CACGTTCTCG CCCGAAGGAA CCTTCAAGGG CGTCTCCCAG 
AGACTGGACT ATCTGGTCGA ACTCGGTGTG ACCGCCATTG AGCTCATGCC GGTTGCCGAT 
TTTCCGGGCT CACGAAACTG GGGCTATGAC GGCGTTCTGC TTTACGCGCC GGATAGCCGT 
TACGGACGTC CGGAGGATCT CAAGGAACTG GTTCAGGCCG CGCATGAACG GGGACTGATG 
ATTCTGCTCG ATGTCGTCTA CAATCACTTC GGGCCGGAAG GAAACTATCT TCACCTTTAT 
GCAAAGGAAT TCTTTACTGG GCGCCATCAC ACTCCGTGGG GTGCGGCAAT AAATTTCGAT 
GGCCCCGCAA GTGGACGGGT ACGCGAGTTT TTCATCCACA ACGCGTTGTA TTGGCTGCAA 
GAGTATCATT TCGACGGCCT GCGGCTCGAT GCAGTCCACG CGATCATCGA CCATTCCAGT 
CCGCACATCC TTGTCGAACT GGCGGAGCGT GTTCGTGCCG AGGTCGGTAC AGAGCGCCAC 
GTGCATCTGA TCCTGGAAAA CGATGCCAAC AATGCCCGCT ATCTGACAAA TAGTTGGTAC 
GACGCGCAGT GGAACGACGA TATTCACCAC GCTCTGCATG TGCTTTCTAC ACAGGAGGGC 
GATGGATACT ATGTGGATTA TGCCGACAAT CCGGTACGCC ATCTCGGGCG CTGCCTGGCG 
GAAGGGTTTG CCTATCAGGG AGAGATATCC GTTTATCGCG ACGATATGGC GCGTGGAGAG 
GCGAGCATTC ATCTGCCGCC CCAGGCTTTC ATTTCCTTTC TGCAATCCCA CGACCAGGCG 
GGCAACCGTG CATTTGGCGA GCGTATTAGT CATATTGGCG AGGAAGCGTT GACACGTATG 
GCGGCAGCCA TCTATTTGCT GGCTCCCGGC ATTCCCATGC TGTTCATGGG CGAGGAGTTT 
GCCGCAAAAT CGCCTTTCCT GTTTTTCTGC GACTTCGGAC CGGAGCTGCG CGAAGCTGTG 
ACACAGGGGC GACGCAGGGA ATTTGCCCGC TTTGCGCATT TTACGCAAGA CATGGACGAG 
ACAGCGATAC CGGACCCGAA TGCTGTTCAG ACTTTTCTTA TCTCGAAAAT CGATTGGGAT 
TTACTCAGGA ATGAAGCTCA CTTTGCCTGG CTGGAGTATT ACCGCAACCT TATGAAACTT 
CGCAGCGAAA TTATCGTACC GCGCCTTCGC GGAATGAAGG GTAATTCGGC ACATTTTGAG 
GTATTCGCGC CTAAATGCCT GTGGGTCTGC TGGCAGTTGG GCGACGATTC CACCTTGCGG 
CTATTGGCGA ATTTTTCCGA CGAGAGCGTG GCGGCTCCCC GGTTCGGCGG GCAGATCGTG 
TTTGCCTCAC CCGGTGCAAT ACCCCCATCT TCCCGAACAA CCAAAAGTAT CCCGGTGAAA 
AGTATGCTGG CGCCTCGTTC GGTAGTCTGG ATGCTTGAAC CGGCTGCCGA TAAAAGTAAA 
GGCAGTTTTA CCGGATAA 

 

Protein sequence

MLTRLHDMPY GTQITDHGVR FRLWAPGCKQ VGLCLADGRT NEKPERALPM TPRAGGWFES 
TVAEAGAGIR YGFDVNGARV PDPASRFNPD DVHGLSEVID PSAFAWQDAK WRGRPWEEAV 
IYELHVGTFS PEGTFKGVSQ RLDYLVELGV TAIELMPVAD FPGSRNWGYD GVLLYAPDSR 
YGRPEDLKEL VQAAHERGLM ILLDVVYNHF GPEGNYLHLY AKEFFTGRHH TPWGAAINFD 
GPASGRVREF FIHNALYWLQ EYHFDGLRLD AVHAIIDHSS PHILVELAER VRAEVGTERH 
VHLILENDAN NARYLTNSWY DAQWNDDIHH ALHVLSTQEG DGYYVDYADN PVRHLGRCLA 
EGFAYQGEIS VYRDDMARGE ASIHLPPQAF ISFLQSHDQA GNRAFGERIS HIGEEALTRM 
AAAIYLLAPG IPMLFMGEEF AAKSPFLFFC DFGPELREAV TQGRRREFAR FAHFTQDMDE 
TAIPDPNAVQ TFLISKIDWD LLRNEAHFAW LEYYRNLMKL RSEIIVPRLR GMKGNSAHFE 
VFAPKCLWVC WQLGDDSTLR LLANFSDESV AAPRFGGQIV FASPGAIPPS SRTTKSIPVK 
SMLAPRSVVW MLEPAADKSK GSFTG