| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A1361 |
|---|
| Symbol | |
|---|
| ID | 3786504 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosospira multiformis ATCC 25196 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007614 |
|---|
| Strand | + |
|---|
| Start bp | 1548172 |
|---|
| End bp | 1550259 |
|---|
| Gene Length | 2088 bp |
|---|
| Protein Length | 695 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637811449 |
|---|
| Product | excinuclease ABC subunit B |
|---|
| Protein accession | YP_412056 |
|---|
| Protein GI | 82702490 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
|---|
| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATTATTA CCTTTCCCAA TAGCCCTTAT AAGCTCAACC AGTTATTTCA GCCCGCAGGC
GATCAGTCTT CAGCGATCGA AAAACTGGTG GAGGGAATAG AGGACGGGCT GGCATTCCAG
ACACTGCTGG GAGTGACGGG CTCCGGCAAG ACCTTTACGA TGGCCAATGT CATTGCGCGG
CTCGGACGTC CCGCGATTAT CATGGCGCCA AACAAGACCC TCGCGGCGCA GTTGTATGCG
GAAATGCGGG AGTTTTTCCC GGAAAATGCC GTCGAGTACT TTGTATCGTA TTACGACTAT
TATCAGCCGG AAGCATATGT CCCGTCACGG GACCTTTTTA TCGAGAAAGA TTCCGCAATC
AACGAGCATA TCGAGCAGAT GCGCCTGTCT GCCACCAAGG CACTGCTCGA GCGGGACGAT
GCCATCATCG TCGCCACGGT GTCGTGCATT TATGGAATAG GCGATCCCGT GGACTATCAC
GGAATGATCC TCCATCTGCG GGAGCATGAA AAGATCACCC AAAGGCAGGC AATACAGCGT
CTGACAGAAA TGCAATACGA GCGTAACGAA TTCGAGTTCA GCCGAGGAAC CTTCCGGGTG
AGGGGAGATG TGCTCGACAT CTTTCCCGCG GAAAGCTCGG AAACCGCCGT GCGTGTTTCC
CTGTTTGATG ACGAGGTGGA AAGCATGACA TTGTTCGATC CTCTTACCGG TCGCACCTCG
AGAAAGGTAT CGCGCTATAC CGTTTATCCT TCCAGCCATT ACGTGACGCC AAGGAGCACC
ACTTTGCGCG CCATCGAGAC AATCAAGACC GAGTTGAGGG AACGCATGGA TTTTTTCCAC
CAGCACAACA AGCTGGTAGA GTTGCAACGC ATCGAACAAC GCACTCGTTT CGATCTGGAA
ATGCTCAACG AACTGGGTTT CTGCAAAGGC ATCGAGAACT ATTCGCGTCA TTTGTCAGGA
AAAAAACCGG GAGAACCGCC GCCCACCTTG ATGGATTACC TGCCGCCCCG AACGCTGATG
GTGATCGATG AGAGTCACGT AACGGTTCCG CAAGTCGGAG GAATGTACAA GGGTGATCGG
GCCCGCAAGG AAAATCTTGT CGATTATGGG TTTCGCCTGC CTTCAGCGCT GGATAACCGT
CCCCTCCGGT TCGATGAATT CAGGAAAATC ATGCCGCAAA CGGTGTTTGT GTCTGCGACA
CCGGCGGAAT TCGAAAAGAT ACACAGTGGT CAGGTTGTCG AGCAGGTGGT GCGGCCCACA
GGTCTCGTAG ATCCGCAGAT CGAAGTCAGA CCGGCGAGCA CTCAGGTGGA CGATCTGATG
TCGGAAGTAA GGCTGCGTAC CGCAAAGGAT GAGCGGGTGC TGGTAACGAC GCTCACCAAA
CGCATGGCGG AGGATCTGAC GGATTATTTT GCCGACCACG GCATCAGAGT GCGGTATCTG
CATTCCGATA TCGATACGGT GGAAAGGGTG GAGATTGTGC GTGACCTGAG ACTGGGAAAA
TTCGATGTGC TGGTCGGCAT CAATCTGTTG CGTGAGGGGC TGGATATGCC GGAGGTATCG
CTGGTAGCCA TACTGGATGC GGACAAGGAG GGCTTTCTTC GCTCAGAGCG TTCATTGATA
CAGACCATCG GCCGCGCGGC GCGCCACATC AATGGCACTG CACTTCTTTA TGCGGACAGG
ATTACAGAAT CCATGCGGCT GGCAATGGAT GAGACCGAGC GACGGCGCAA CAAGCAGATC
CTGTTCAATC AGGAGCATGG GATTACGCCG CGAAGCGTGC ATAAGCGCGT CAAGGACCTG
ATTGACGGTG TTTACAGCAT GGAAACAGCC CAGCAGCAGC TTAAGGCAGC GCAAACGCAG
GCGCGGTACG AAGCCATGAG CGAGACGCAG CTCGCAAAAG AAATCAAGTC ACTGGAAAAA
CAGATGCACG AGGCAGCAAA AAATCTCGAA TTCGAGAAGG CTGCGGAGTA TCGGGATGAA
TTAAAAAAAT TAAAAAACAA GCTCTTTGTC GGATTTGTGG AGCCCCAGGA TGAGAAAGGA
ACGGGAGCGG CGAAATCCCG GGGGAAGGTG CCAAGAGCGG TGAGATAG
|
|---|
| Protein sequence | MIITFPNSPY KLNQLFQPAG DQSSAIEKLV EGIEDGLAFQ TLLGVTGSGK TFTMANVIAR
LGRPAIIMAP NKTLAAQLYA EMREFFPENA VEYFVSYYDY YQPEAYVPSR DLFIEKDSAI
NEHIEQMRLS ATKALLERDD AIIVATVSCI YGIGDPVDYH GMILHLREHE KITQRQAIQR
LTEMQYERNE FEFSRGTFRV RGDVLDIFPA ESSETAVRVS LFDDEVESMT LFDPLTGRTS
RKVSRYTVYP SSHYVTPRST TLRAIETIKT ELRERMDFFH QHNKLVELQR IEQRTRFDLE
MLNELGFCKG IENYSRHLSG KKPGEPPPTL MDYLPPRTLM VIDESHVTVP QVGGMYKGDR
ARKENLVDYG FRLPSALDNR PLRFDEFRKI MPQTVFVSAT PAEFEKIHSG QVVEQVVRPT
GLVDPQIEVR PASTQVDDLM SEVRLRTAKD ERVLVTTLTK RMAEDLTDYF ADHGIRVRYL
HSDIDTVERV EIVRDLRLGK FDVLVGINLL REGLDMPEVS LVAILDADKE GFLRSERSLI
QTIGRAARHI NGTALLYADR ITESMRLAMD ETERRRNKQI LFNQEHGITP RSVHKRVKDL
IDGVYSMETA QQQLKAAQTQ ARYEAMSETQ LAKEIKSLEK QMHEAAKNLE FEKAAEYRDE
LKKLKNKLFV GFVEPQDEKG TGAAKSRGKV PRAVR
|
|---|
| |