| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A1313 |
|---|
| Symbol | |
|---|
| ID | 3786268 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosospira multiformis ATCC 25196 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007614 |
|---|
| Strand | + |
|---|
| Start bp | 1505309 |
|---|
| End bp | 1506037 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637811401 |
|---|
| Product | sigma 28 (flagella/sporulation) |
|---|
| Protein accession | YP_412008 |
|---|
| Protein GI | 82702442 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
|---|
| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACACTT CGGTCGGCAC CATCGATAAA CAACAGCATA TCGTGGAGTT TACTCCGCTT
GTAAAACGGA TTGCCAATCA CATGATGGCG AGATTGCCTG TCAGTGTTGA AGCAGATGAC
CTGGTACAGG TCGGAATGAT CGGCCTGATG GAAGCGTTGA ACCGGTATGA AGAGATGCCC
GGGGCACAAT TCGAGACTTA TGCGCAGCAG CGCATTCGCG GCGCCATGCT CGACGAACTG
CGCCAGCTGG ATTGGCTTCC GCGAGGAGCC CGAAGGGTAA TGCGCCAGAT CGAGAGCGCT
ATCAATGTGC TGCAGCACCG CCTCGGCCGC TCTCCTTCGG AGCGGCAGAT CGCCGAAGAA
CTCGGCGTAT CGATCGAAAG TTACCAGCAG ATGCTGTTTG AAGCAAAAGG AACCCAGCTT
ATCCATTATG AGGATTTTTC GGACGATGAG GACGATGATT TTCTGGAGCG CAACTGTGCC
GACAATACTG CTGATCCGCT GGCGGCGCTG CTCGACGGCG ATTTACGCCG GATTTTGATC
AACGCGATAG AGATCCTGCC CGAGCGTGAA AAAACGCTGA TGGGGCTGTA CTACGAGCAG
GAACTGAATT TCAAGGAAAT CGGCGCCGTT TTGGGCGTAT CCGAATCGAG AATATGTCAG
ATGCACAGTC AGGCGATTGC CCGGCTACGC GTGCGACTCA AGGAATGCGC ATGGACTTCA
ATAGCATAA
|
|---|
| Protein sequence | MYTSVGTIDK QQHIVEFTPL VKRIANHMMA RLPVSVEADD LVQVGMIGLM EALNRYEEMP
GAQFETYAQQ RIRGAMLDEL RQLDWLPRGA RRVMRQIESA INVLQHRLGR SPSERQIAEE
LGVSIESYQQ MLFEAKGTQL IHYEDFSDDE DDDFLERNCA DNTADPLAAL LDGDLRRILI
NAIEILPERE KTLMGLYYEQ ELNFKEIGAV LGVSESRICQ MHSQAIARLR VRLKECAWTS
IA
|
|---|
| |