| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A1280 |
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| Symbol | |
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| ID | 3784317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosospira multiformis ATCC 25196 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007614 |
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| Strand | + |
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| Start bp | 1471746 |
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| End bp | 1473467 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637811367 |
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| Product | Type I secretion system ATPase, PrtD |
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| Protein accession | YP_411975 |
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| Protein GI | 82702409 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4618] ABC-type protease/lipase transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTACA AGCTCAGAAT CCCGAAAACG GAAATAGCTC GGGCTTTGGC CGATTTCAAG
GGTGCTTTCA GGACCGTAGG GGTTTTCAGC GCGATCATCA ATCTGTTGCT GCTGGTTCCG
GCCCTGTACA TGCTGCAGGT GTACGACCGG GTGCTCGCCA GCAGGAATGA AACCACCTTG
CTGATGCTGA CCTTGCTTGC GCTGGGTGCG TTTCTGTTCA TGAGTGCACT GGAGCTCGTA
CGCAGCTTTA TTCTCATCCA ACTCGGCGCC CAACTCGACG CCAGGATGAA CCGGCGGATT
TATGCAGCCG CATTCGAACA GAACCTGAAA CGGGCAGGGG GCAATGCGGG GCAGGCACTG
CAGGATCTGG CCACCATCCG CCAATTTTTG ACCGGCCAGG GATTGTTTGC TTTCTTTGAT
GCACCCTGGT TTCCGGTATA TTTGCTTGTC ATTTTCCTGT TTGACCCCTT TCTGGGGTTG
TTCGCGCTCG TCGGAACGAT AGTGCTGGTG GTCCTGGCTT TCGTGAATGA AACCGTGTCC
AAAAAACCCC TGGAGGAGGC CAATGCAGTT GCGGTTACTT CGGGCACTCT GGCGACCAAC
AATCTGCGCA ATGCGGAAGT GATTGCCGCG ATGGGCATGC TGCCCAACCT GATGAGTCGC
TGGCTCACGC TGAACAACCG TTTTCTGCAA CTGCAAGCCG AAGCCAGTCA GAAGACTGGA
ACAATCACCT CCATCACCAA GTTCGTGCGC GTTTCGATGC AATCACTCAT ATTGGGATTG
GGAGCACTGC TTGCACTGGA AGGAGAAATC ACGCCGGGCA TGATGATCGT GGCGACGATC
CTCATGGGGC GGGCCTTGAG CCCGGTCGAG CAATTGATCG GCATTTGGAA AAGCTGGAGC
AGCGCACGCA CTGCCTATCA TCGCCTGACG GAACTGCTGG AGACGAATCC GGCGCGGGAA
ACAGGAATGG CGCTACCCAA ACCGGTCGGG AAGCTATCGG TGGAGGGGGT GACAGCCGCG
CCTCCGGCGG CTACGATGGC TGTCCTGAAA AACCTGAGTT TTGCGGTGAT ACCCGGTGAG
GTGCTGGGCA TCATCGGGCC CAGCGGTTCC GGAAAATCGA CTTTGGCGCG GTTGCTGGTA
GGCGTCTGGC CTGCAGCTGC AGGCAAGATA CGCCTGGATG GGGCGGACGT TTACTACTGG
AACAAGGAAG AACTGGGACC CTACATCGGC TACCTGCCGC AGGATGTCGA ATTGTTTGCC
GGTACTGTCG GGGAGAATAT CGCCCGGTTT GGGGAGGTGG ATTCGGAAAA AGTGGTGGTA
GCGGCCCAGC GCGCGGGGAT TCATGAAATG GTCCTGTGCT TGCCGCAAGG GTATGACACC
CCTCTCGGGG ATGGGGGGGC TGGCTTGGCA GGCGGACAAA AACAGCGGCT CGGCCTTGCG
CGCGCGATGT ATGGCGATCC CTCCCTGATT GTGCTGGACG AGCCCAACTC GAATCTTGAT
GAAACCGGCG AGCAGGCACT GGTCGAAGCC ATTATCGACC TGCGCAGGCG CGGAAAAACC
ATTGTGATAA TCAGTCATAG AAGCAGCGTG CTGCGCACTA CGACAAAACT GCTGCTGCTG
GTGGATGGGA AAGCGCAGTT GTTCGGTCCG ACAGGAGAGG TTCTGGCGAA ATTGACGAAA
CCCAACCGGC AACCGGCGCA GCAGGTGCAA CAGACCGGGT AA
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| Protein sequence | MSYKLRIPKT EIARALADFK GAFRTVGVFS AIINLLLLVP ALYMLQVYDR VLASRNETTL
LMLTLLALGA FLFMSALELV RSFILIQLGA QLDARMNRRI YAAAFEQNLK RAGGNAGQAL
QDLATIRQFL TGQGLFAFFD APWFPVYLLV IFLFDPFLGL FALVGTIVLV VLAFVNETVS
KKPLEEANAV AVTSGTLATN NLRNAEVIAA MGMLPNLMSR WLTLNNRFLQ LQAEASQKTG
TITSITKFVR VSMQSLILGL GALLALEGEI TPGMMIVATI LMGRALSPVE QLIGIWKSWS
SARTAYHRLT ELLETNPARE TGMALPKPVG KLSVEGVTAA PPAATMAVLK NLSFAVIPGE
VLGIIGPSGS GKSTLARLLV GVWPAAAGKI RLDGADVYYW NKEELGPYIG YLPQDVELFA
GTVGENIARF GEVDSEKVVV AAQRAGIHEM VLCLPQGYDT PLGDGGAGLA GGQKQRLGLA
RAMYGDPSLI VLDEPNSNLD ETGEQALVEA IIDLRRRGKT IVIISHRSSV LRTTTKLLLL
VDGKAQLFGP TGEVLAKLTK PNRQPAQQVQ QTG
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