| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A1246 |
|---|
| Symbol | |
|---|
| ID | 3786022 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosospira multiformis ATCC 25196 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007614 |
|---|
| Strand | - |
|---|
| Start bp | 1430388 |
|---|
| End bp | 1433450 |
|---|
| Gene Length | 3063 bp |
|---|
| Protein Length | 1020 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637811331 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_411941 |
|---|
| Protein GI | 82702375 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3899] Predicted ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.571861 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACAA CTTACTTGGA ATTCCATCCT TTCAGGCTGG ATAAGATCAA CGCCATCCTA
TGGCGCAACG ATCAAGTAGT ACCGTTACGT CCGAAAAATT TCGCTATGTT GTGTTACCTG
GCGGAGCGGG CTGGCACCCT GGTGACCAAG GATGAGTTGC TTGACGCGGT ATGGCAGCGC
CGCTTCGTCG GAGAAGCAGT GCTGAAAGTA TGTATCAACG AAGTGCGGCG GGCTCTTGGA
GACAGTGTTT CCGCTCCCAC CTATCTTTTA ACCGTTCCCA AACGCGGCTA CCGTTTCATC
GCGCAGGTTA CTGAAGTCAA GTCGTCAGAG GAAGTGGAAG AAGTAATCTG CCCCGTTTTC
CCCAAAAACC AGCGCTCTGA CAAGGTCGCA TATTGGATAG ACCGCCCGTC TCCACAAGCT
CGCTTGCTGA CAATCTGGCA AAAATCACTG GTGGGTTCGC GCCAGATCGT TTTTGTTACC
GGGGAAAGTG GAATCGGCAA GAGCACGCTG ATCGAGATGT TTCTCTCCAC AATATCCAGT
CAAAGCCCGG GGGTTTTGCG CATGCGCTGC ATAGAGCGCT TTGGCCAGGG TGAAGCCCTG
CTCCCGATGA TCGAGGCAAT TGAAAAGCGT TGCAATGCGC CAGGGGGGGG AAAACTCGTT
GAACTGTTAT ATCGTCACGC ACCGGTTTGG CTTGCGCAAT TGCCGTCCGT GCTTCGCCCC
GAGGAGCGTG TGGCGCTTCA GCAGGAGATT TTTGGCGCAA GCCGGGAACG CATGGTACGG
GAAGGTTGTG AACTGCTGGA AACCTTGAGC AAAGTGCCCC TGATTCTCGT GCTTGAGGAT
CTTCATTGGA GTGATCATGC GACTCTTGAT TTTTTAAGCT TGCTTGCGCA GCGTCATGTG
CCAGCATACT TGATGGTGCT CGCCACCTAT CGCCCCATCG ATGCAAGCCA GCGGGTGCAC
CCAGTTACAG AAGTTCACCG GGATTTGCAG TTGCGAGGAA TCTGTTCTGA AGTCGCCCTT
GAGCCGTTTT CCTGCAATGA AGTCAAACAT TACCTCACTC GACGTTGCCC AGGCATAAAT
ATTCCCGATT CGATCAGTCA GGCACTTTTC ATAAGAACCG GTGGACATCC TTTGTTCATA
TCCAATCTGA TCGAATATTT AATGGAGCAA CATCAATGGT CACCGTTATC CCAGCAGATC
GGAATCGATA CAGCGCTGCC GGAAACGATC CGCCGCGTCA TCGAGCGTGA AATCGAACGG
CTCAGCCATG ATGAACAACG GGTGCTGACG GTGGCGAGTG TCGCGGGAAT GCGGTTTAGT
GGGAACCTGC TTTGCAGTGT TCTGGGTATG GAGATCGCCG AAGCAGACCG CTGCTGCAAT
GCCCTGGTTA GACGAGGCCA GATATTGGTG TCCGATGGAA TGGAGCAAAG CACGAAAGGA
GTTGTCGCGG GCTACTATGC ATTCCGCCAT GCCCTGTACC TCGAAGTCTT CTACCAACGG
CTTTCTCCCT CCGAAACGAT ACGAATGCAC CTTCGCATCG GAGAATACCT TGAAAAGGCA
TACGGCGAGC AAAACGTGGA GCATGCAGGG GAACTCGCCC TGCATTTTGA AAACGGATGG
GATTGGCTTC GCGCCATCCG CTATCTCGTG CAGGCGGCTG ACAACAGCAC CAGGCGCTTT
GCCAATCGGC AGGCACATGA CTATCTGGCG CGCGCCGTTC GAATGATAGA ACGCTTGCCT
GATGAGCAAC AAGCGAAAAC ACGCATAAGC CTCCTCAAGC AATCAGCGGC GGTAAGACGC
TCAATGGGCG ATATGGCAGG AGCAAAAACT GATCTGGAGA AAATGCTGGC AGCCGCCAAA
GCTTTGGGAG ACAGCCGGGA ACAGGCGGTG GGACTCCTCG AATTGAGCCG CGTCCTTGTT
TTGTTGAACC GTCTTGAATG TCTCGAGTTT GCGGAGCAGG CGGTCTCTGC TTCCACAGCA
CTTGAAGACA AGGTTTTTCA TTCAATCGTC AAGGGCATGT GGGGTGGCTT GAATCTGTTG
CTCCGGCCAT GGCGGGAGGA TTATTCTGCC GCTTGTCACG AGTCTATGGA TGCGGTGCGC
GCAACGGGAA ATCCCCTGGC TCTTCACTCG CGCTTGACTC AGCATATTTA CGTTGAACTG
CTTGCCTCGA ATTACCAGGC TGCTGCGACG ACAGCAGTCG AAGCTCTGGC GTTATCACGC
GTAATGGGAG ATGGCTACAT GTTCATCGCG GGCCATTATT ACTATGGATT AACGCTGCTG
CATAAGGGTG AATGGGGCAG ATTGCGCGAA ACCGCAGAGC AAAGCAGGCG CGCGTTCGAG
GGGCATGACG CTGGCTTGCT GCTTCGGTTG CATCGCCACA TCCTGCTGGG ATGGTTGCAT
GTGGTAAGTG GCGATTTTTC GGGTGCCAAA GCGTATTGCG AGGAAGCGCT GTCAGAAGGC
GTCGGTGCCT GGGCTGACTT CGTTTCGGTT CATTGTTCCG CAATCCTGGG AAAGGCCTTG
CACGGGCTAA AAGATTATGC GGGAGCCATT CGATGCTTTG ACGCTTTTTT TCAGGCGGAA
AAGAATAATG CTCTCCCGAT ATTCTCCAAC TATTTCTTCC CTGCTTGCTT GGGAATGGGA
GAAACATGGC TCGCACTGGG AAAACTGGAT AAGGCGCGTC GCTATGCGCA GCGCTTATAT
GATCTTTCCA GCGGTCCCTC TGAACGCACC TACCTTGCAC TCAGTCATCG CCTGTTTGCC
GAGATTGCGA TAGTAGAAGA GAGCTGGGAC GAAGTACATT CGCATATTAC AAAAGCACTT
GAAATCGTGG AAAATGCGGA AATTCCCCTT GCAGCCTGGA GGGTCTACGC GACTGGAGAA
AAACTGCATT ATCGGCAGGA TGACGGGAAA AGGATGGGTT ACTACCGATC AAAAAAACAG
GATGAAATCG ATCAACTCCT CAACTCTCTT CAACCGTCGG ATCCTTTAAG GAAACATTTG
CTGAATCTTG CTGGAACCCA TGAATGCGAT TCTCTTTCAC CGGTCAGATA CAGCCCGCTT
TAA
|
|---|
| Protein sequence | MQTTYLEFHP FRLDKINAIL WRNDQVVPLR PKNFAMLCYL AERAGTLVTK DELLDAVWQR
RFVGEAVLKV CINEVRRALG DSVSAPTYLL TVPKRGYRFI AQVTEVKSSE EVEEVICPVF
PKNQRSDKVA YWIDRPSPQA RLLTIWQKSL VGSRQIVFVT GESGIGKSTL IEMFLSTISS
QSPGVLRMRC IERFGQGEAL LPMIEAIEKR CNAPGGGKLV ELLYRHAPVW LAQLPSVLRP
EERVALQQEI FGASRERMVR EGCELLETLS KVPLILVLED LHWSDHATLD FLSLLAQRHV
PAYLMVLATY RPIDASQRVH PVTEVHRDLQ LRGICSEVAL EPFSCNEVKH YLTRRCPGIN
IPDSISQALF IRTGGHPLFI SNLIEYLMEQ HQWSPLSQQI GIDTALPETI RRVIEREIER
LSHDEQRVLT VASVAGMRFS GNLLCSVLGM EIAEADRCCN ALVRRGQILV SDGMEQSTKG
VVAGYYAFRH ALYLEVFYQR LSPSETIRMH LRIGEYLEKA YGEQNVEHAG ELALHFENGW
DWLRAIRYLV QAADNSTRRF ANRQAHDYLA RAVRMIERLP DEQQAKTRIS LLKQSAAVRR
SMGDMAGAKT DLEKMLAAAK ALGDSREQAV GLLELSRVLV LLNRLECLEF AEQAVSASTA
LEDKVFHSIV KGMWGGLNLL LRPWREDYSA ACHESMDAVR ATGNPLALHS RLTQHIYVEL
LASNYQAAAT TAVEALALSR VMGDGYMFIA GHYYYGLTLL HKGEWGRLRE TAEQSRRAFE
GHDAGLLLRL HRHILLGWLH VVSGDFSGAK AYCEEALSEG VGAWADFVSV HCSAILGKAL
HGLKDYAGAI RCFDAFFQAE KNNALPIFSN YFFPACLGMG ETWLALGKLD KARRYAQRLY
DLSSGPSERT YLALSHRLFA EIAIVEESWD EVHSHITKAL EIVENAEIPL AAWRVYATGE
KLHYRQDDGK RMGYYRSKKQ DEIDQLLNSL QPSDPLRKHL LNLAGTHECD SLSPVRYSPL
|
|---|
| |