Gene Nmul_A1217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmul_A1217 
Symbol 
ID3786148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosospira multiformis ATCC 25196 
KingdomBacteria 
Replicon accessionNC_007614 
Strand
Start bp1401359 
End bp1401979 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content59% 
IMG OID637811302 
Productcytochrome c biogenesis protein CcmA 
Protein accessionYP_411912 
Protein GI82702346 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component 
TIGRFAM ID[TIGR01189] heme ABC exporter, ATP-binding protein CcmA 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCACGC TGGAAGGAAT TGACCTGACA TGCATCCGCG GTGACCGCAA GCTGTTCAGT 
GGCGTCAATT TTTTGCTCGA ATCCGGGGGG TTGATGCAGG TTCAGGGCCC CAACGGCAGC
GGTAAAACGA GTCTTCTACG CATGTTGTGC GGACTGGCTT CGCCGGCCGA GGGCGAAATC
CGCTGGGATG GTACCCAGAT TCGCTCTCTT GGCGGAGATT ATTTTGGTGC GATGACCTAT
CTCGGCCATT TAGGCGGGGT AAAAGACGAT CTGACTGCCA TCGAGAATTT GCGCATCTCC
AGCGCACTGG GCGGGGTTGA TCTGGATGAA CGCAAGGCCC ATGACGCCTT GCAGCACATG
GGATTGGGCG GACGCGAACT GTTGCCTGCC AAGGTGTTGT CGCAGGGACA GCGCCGCCGG
GTGACGCTGG CGCGCCTGCT GGTATGCGGT ACCGTGCTCT GGATACTGGA TGAGCCCCTG
ACTGCACTCG ATACGAGTGC AGTCAAGCTG GTACAAGGTT TGATAGAGCG GCACCTGGAA
CACGGGGGCA TGATCGTGAT GACCACCCAC CAGGAAATCG AGATAGCAGG CGCCGCCATC
CAGCGGCTGC AGCTCACCTG A
 
Protein sequence
MPTLEGIDLT CIRGDRKLFS GVNFLLESGG LMQVQGPNGS GKTSLLRMLC GLASPAEGEI 
RWDGTQIRSL GGDYFGAMTY LGHLGGVKDD LTAIENLRIS SALGGVDLDE RKAHDALQHM
GLGGRELLPA KVLSQGQRRR VTLARLLVCG TVLWILDEPL TALDTSAVKL VQGLIERHLE
HGGMIVMTTH QEIEIAGAAI QRLQLT