| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A1108 |
|---|
| Symbol | |
|---|
| ID | 3785688 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosospira multiformis ATCC 25196 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007614 |
|---|
| Strand | - |
|---|
| Start bp | 1276275 |
|---|
| End bp | 1277390 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637811193 |
|---|
| Product | putative membrane-bound dehydrogenase oxidoreductase protein |
|---|
| Protein accession | YP_411803 |
|---|
| Protein GI | 82702237 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATCA CAAAAATTCT CATACGTTTC ATGGCCACTT GCCTGCTCTG TTATGGCTTA
CCTGCGATGG CAGACAGCAA AACCGGCAAG CTGCCGCTGG ACAAGATCAA GTTACCGGCC
GGATTTTCGA TCGAAGTGTG GGCTGAAGTA CCGAACGCGC GGGGACTGGC ACTGGGAAAA
AACGGCACGG TGTTTGCAGG CTCGATGGAC GAGGGGAATG TCTATGCCAT CAGGGACAAT
GGAGGGGAGC GTGAAGTAAA AACCATCGCC AGAGGGCTTA ATCTTCCCAT AGGGGTCGCC
TTTCGCGATG GCGCGTTATA TGCCTCCTCG GTCGACCGCA TCCTGCGTTT TGACGGTATT
GAGGAAAAAC TCGATCAGCC CGGAAAACCG TACGTTGTCA CCGAACGATT TCCCAACGAG
AAACACCATG GGGGCAGATA TATAGGTTTT GGCCCGGATG GTCTTCTGTA TGTGGCGGTG
GGCGCTCCAT GCAATGTCTG CGAAACGGAG CCGGAGAAGT TTTCGCTGAT TTCCCGCATC
AATCCGGATG GCTCGAACTA TGAGGTCTTC GCATACGGGA TACGAAACTC GGTAGGATTC
GATTGGCATC CCGAAACAAA GGAATTGTGG TTTACCGATA ACGGTCGGGA CTGGATGGGA
GACAACTTGC CGCCGGACGA ACTCAACCGT GCGCCAAAAA AGGGAATGCA TTTCGGCTAT
CCCTACTGCC ATTCCGACGA CATCCTTGAC CCGAAATACG GTGCAAAGCG GGATTGCCGC
AAGCTCGTTT CACCCGCAGC GAAACTTCCC CCGCACGCAG GCGCCCTGGG GATGCGCTTC
TATACAGGGA CCATGTTTCC TCCCCAATAT CGCAACAGCA TCTTTATAGC CGAACATGGC
TCATGGAACC GGCGCAATAA AATCGGCTAC CGCATCGAGT TCGCAAAGAT AAAGAACAAC
AAGGTGATAA AGCAGGAAGT GTTTGCCGAA GGCTGGCTGG AAAATGAAAA AAATTGGGGA
AGACCCGTGG ATGTGCTGGT GATGCCGGAC GGGGCACTGC TCGTGTCGGA TGATTTCGCC
GGGGTGATTT ATCGGATCAG CTACAGGAAA CCTTGA
|
|---|
| Protein sequence | MPITKILIRF MATCLLCYGL PAMADSKTGK LPLDKIKLPA GFSIEVWAEV PNARGLALGK
NGTVFAGSMD EGNVYAIRDN GGEREVKTIA RGLNLPIGVA FRDGALYASS VDRILRFDGI
EEKLDQPGKP YVVTERFPNE KHHGGRYIGF GPDGLLYVAV GAPCNVCETE PEKFSLISRI
NPDGSNYEVF AYGIRNSVGF DWHPETKELW FTDNGRDWMG DNLPPDELNR APKKGMHFGY
PYCHSDDILD PKYGAKRDCR KLVSPAAKLP PHAGALGMRF YTGTMFPPQY RNSIFIAEHG
SWNRRNKIGY RIEFAKIKNN KVIKQEVFAE GWLENEKNWG RPVDVLVMPD GALLVSDDFA
GVIYRISYRK P
|
|---|
| |