Gene Nmul_A1079 details

Gene Information

• Locus tag: Nmul_A1079
• Symbol: sucC
• ID: 3784693
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosospira multiformis ATCC 25196
• Kingdom: Bacteria
• Replicon accession: NC_007614
• Strand: +
• Start bp: 1245277
• End bp: 1246467
• Gene Length: 1191 bp
• Protein Length: 396 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 637811163
• Product: malate--CoA ligase subunit beta
• Protein accession: YP_411774
• Protein GI: 82702208
• COG category: [C] Energy production and conversion
• COG ID: [COG0045] Succinyl-CoA synthetase, beta subunit
• TIGRFAM ID: [TIGR01016] succinyl-CoA synthetase, beta subunit

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.00492419
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGATATAC ATGAGTATCA GGCAAAAGAA ATTTTAATGA GGTATGGGGT CAAGATAGCG 
GAAGGGGGGT TGGCATATAC GATAGAAGAA AGTGTGCAGC GTGCCAGGGA AATCGACGGC 
AATGTATGGG TGGTGAAGGC GCAGATCCAT TCGGGGGGGC GGGGCAAGGC GGGCGGCATC 
AAGGTATGCA GGACTCATGA CGAAGTCCGG GCAGCCTCTG AGGAGTTGCT GGGAAAGATT 
CTGGTGACCC GTCAGACCGG AGCCGTGGGG AAGGTGTGTA CACGGGTATA TGTGGAAGCG 
GGCACGCACA TTGCCAGGGA GATGTATCTC TGCTTTCTGA TAGACAGGAG TTCGGAGCGC 
ATCGTCATGA TAGGCTCGGG GCAGGGTGGA ATGGAAATCG AGGAACTGGC TCACACAAAT 
CCTCAGGCCA TCAAGAAGAT TTTTATCGAA CCCGCAGTTG GGTTGCAGGA TTTTCAAGCG 
AGAGAGATGG CTTTTGCACT AGGGGTGGAA GCGGCACAAC TGCCTCATGC CGTTAAAACC 
ATTCGGGGGT GTTACCGCGC CTTGCGTGAT CTGGATGCGA ACATGGTGGA AATCAACCCC 
CTCGTGATCA CTGGGAGCGG CGAACTTCTT GCTCTTGACG CAAAAATGAG CTTCGACGAA 
AACGCCTTGT TTCGCCGGCA CGAGGTTGCC GAATTGCGTG ATAAAACACA AGCCGATCCT 
CGGGAGGTGG CAGCCTCCGA TCATGGCTTG AGCTACATCG GATTGAACGG TGACATCGGA 
TGCATGATAA ACGGCGCCGG GCTTGCCATG GCAACGATGG ATATGATCAA GCTCGCGGGC 
GGCGAGCCGG CAAATTTCCT TGATGTGGGA GGAGGGGCGT CCGCGGAGCG TACGGAAAAG 
GCGTTTCGCC TGGTTTTGGC TGATAAAGGA GTCAAGGCGA TGCTGGTCAA TATTTTTGCA 
GGTATTAATC GCTGCGACTG GATTGCGCAA GGCGTCGTGC AGGCGGTAAG AAATATCGAT 
ATGAAAATCC CGCTGGTCGT GCGCTTGTCC GGTACAAATG TCGAGGAGGG CCAGCGGATC 
ATTGCCGAAA GCGGTTTGCC GATCATCACA GCGGGAACGC TGGCGGAAGC AGCGGAGAAG 
GTTGTCCAGG CGCGCAATGG CGCGGTTGCG GAAGAGTGCA AAGGGATATA A 

 

Protein sequence

MDIHEYQAKE ILMRYGVKIA EGGLAYTIEE SVQRAREIDG NVWVVKAQIH SGGRGKAGGI 
KVCRTHDEVR AASEELLGKI LVTRQTGAVG KVCTRVYVEA GTHIAREMYL CFLIDRSSER 
IVMIGSGQGG MEIEELAHTN PQAIKKIFIE PAVGLQDFQA REMAFALGVE AAQLPHAVKT 
IRGCYRALRD LDANMVEINP LVITGSGELL ALDAKMSFDE NALFRRHEVA ELRDKTQADP 
REVAASDHGL SYIGLNGDIG CMINGAGLAM ATMDMIKLAG GEPANFLDVG GGASAERTEK 
AFRLVLADKG VKAMLVNIFA GINRCDWIAQ GVVQAVRNID MKIPLVVRLS GTNVEEGQRI 
IAESGLPIIT AGTLAEAAEK VVQARNGAVA EECKGI