Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmul_A0950 |
Symbol | |
ID | 3785210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosospira multiformis ATCC 25196 |
Kingdom | Bacteria |
Replicon accession | NC_007614 |
Strand | + |
Start bp | 1102426 |
End bp | 1103580 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637811033 |
Product | secretion protein HlyD |
Protein accession | YP_411645 |
Protein GI | 82702079 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.57805 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAACAA AAAAAACACT GGTCCGTTTC GCCATTATCA TTGTTATTCT CATGGTGGCG GGTTATGCAA TATGGTTTGC AATGCGTCCG GCGCCCATAG AGGTTGAGCT TGCGACCATC GGGCGGAGTA CAGTGGAAGC CACCGTGGTG AATACACGTG CCGGAACAGT GACCGCATGC CGGCGTGCCA AGCTTGCGCC AGCGGCGGGA GGGCAGATTG TCAAGTTGCA GGTCAAGGAG GGTGACAGGG TCAAGAAAGG ACAGGTATTG CTGGAACTGT GGAATACGGA TCTGACCGCC CAGCGCGATC TTGCCCGGCG CCAGCTCATC ACCGCGGAAG AGCGGCGCCG CGAAGCCTGC ATCCTTGCGG CCCATGCCGG CCGCGAGGCC GAGCGTGCGC GTCAGCTCGC CGAGAGAGGC TTCGTCAGCG CCCAGAACCG GGAGAATGCC GATGCCGATG CGCGCGCCCG GCAAGCGAGC TGCGATGCGA CTATTGCCGA TGTGAAGCGG GCGCGAGCTC AGGTAGAAGT AACAGAGGCG GGGCTGGAGC GCACGGTTCT GACTGCTCCA TTTGACGGCA TTGTGGCGCT TGTCACCGGG GAGCTGGGTG AATATACCAC TCCGTCCCCC CCGGGGATTC CCACCCCGCC GGCTATTGAT CTGATCGATG ATAGTTGTCT GTATGTTACC GCTCCAATGG ATGAAGTCGA TGCGCCCAAG CTGAAGATCG GCCAACTCGC CCGCATTACG ATTGATGCCT TGCCCGGCCA GATCTTCCCC GGCAAGGTGC GGCGGGTGGC GCCCTATGTC ACGGAGGTAG AGAAGCAGGC GCGCACGGTG GATATCGAAG TGGATTTCGA AGAAATACCG GAACGGCCGT TGCTGGTGGG GTATAGCGCA GATGTCGAAG TGGTGATCGA ACGGCATGAG AATGTGCTGC GCGTGCCCAC CCAGGCGATC CGTCAGGGTG GCAAGGTGTT GTTGGTGAAC GAGGAGAACC GATTGGTTGA ACGCAGGCTG GAAACAGGAC TGGCCAACTG GGCATTTACC GAAGTCACCG GTGGCCTGGA GGAAGGCGAT CGCGTGTTGC TGTCATCAGA GGCAAAGGAA ATCAAAGCCG GTATACAAGT CCGGGAGAAG GTTGCCGAGC AGTGA
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Protein sequence | MQTKKTLVRF AIIIVILMVA GYAIWFAMRP APIEVELATI GRSTVEATVV NTRAGTVTAC RRAKLAPAAG GQIVKLQVKE GDRVKKGQVL LELWNTDLTA QRDLARRQLI TAEERRREAC ILAAHAGREA ERARQLAERG FVSAQNRENA DADARARQAS CDATIADVKR ARAQVEVTEA GLERTVLTAP FDGIVALVTG ELGEYTTPSP PGIPTPPAID LIDDSCLYVT APMDEVDAPK LKIGQLARIT IDALPGQIFP GKVRRVAPYV TEVEKQARTV DIEVDFEEIP ERPLLVGYSA DVEVVIERHE NVLRVPTQAI RQGGKVLLVN EENRLVERRL ETGLANWAFT EVTGGLEEGD RVLLSSEAKE IKAGIQVREK VAEQ
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