Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmul_A0934 |
Symbol | |
ID | 3786479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosospira multiformis ATCC 25196 |
Kingdom | Bacteria |
Replicon accession | NC_007614 |
Strand | - |
Start bp | 1080363 |
End bp | 1081619 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637811016 |
Product | RNA-directed DNA polymerase (Reverse transcriptase) |
Protein accession | YP_411629 |
Protein GI | 82702063 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.63429 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAGAGC TTTATCGCAA GCTGTACAGT AACAATCGTC TAAGAAGTGC TTGGCAGTCC ATATACGAAA ACGGTATTTC ATCTAAATCG CCTACAATTA GAACTGAAAT CGAGCAGTTC TCCCTTTCAT TAGAAAAAAA CCTTCGGCGG ATTGCCGATC AGTTGAGAGA AAAACGGTAC GTGTTTTCTC AAAGCTATGG GGTCGCGGTT AAGAAGAAGA ATAACCCTAG CAAAAAGCGA CCGATAGTAA TATCCCCCAT TCCTAATCGC ATTGTTCAGC GAGCGTTGCT AGATGTTGTA CAAGAAATTC CAAGTGTCCG AGCTAAATTA GACTCTGGTT TTAATTTTGG CGGAATTGCA GAAATCGGTG TACCTCAAGC GATTCTCAAA GCTTATAAAA CAGCCCTGGA AAAGCCCTAT TTTATTCGAA CTGACATTTG TGCCTTCTTC GATAATATTC CTCGTTCACA AGCATTAGAA ATTATTACTT CTGCATCTAA GGATGATGAT TTCAATACGT TGTTAACTCA AGCAACAACA ACAGAGTTGA GTAATCTTAT AACCTTAGGC CGTGACAAGG AACTTTTTCC ATTGGAAGGA AAAGGTGTTG CTCAAGGTTC CTGCCTTTCT CCCGTACTTT GCAATTTGCT TTTAGATGAT TTTGATAAAA AAATGAATGC CCGAGGCATC GTCTGTATCC GATATATCGA CGACTTCATT TTGTTTGCAC CAAGTGAATC AAAAGCATTT AAAGCCTTTG CTAGCGCATC AGCTTTCTTG GAAAAACTAA ACTTAAGTGT ATATGACCCT CGTCACTCTC CCGATAAGGC TGAGCATGGG GTATCCAATA AAGGATTTGA ATTTCTAGGA TGTAGTGTAA GACCTGACCG CATTCGTCCT TCTGATAAGA GCATAAAAAG ACTTAGAGAT CGTGTGAATG AAATATTTGA CAAGGTTATT AAAAAATCCA GTAGTCCGCT CCGATGCATA AACGAAAAAA CTACTTACAA GGATGCGCTA AATGAGGTTA GTAGCACTAT TAGAGGATGG GGTAACACGT ATTCCTTTTG TACAGATGAT CACTTGATGA TTAACCTAGA TAGGTATATC AGCGAAAAAA TTTTGAATTT CAATCGGAGA TATAAGCAAA AAATCCGGGC CTTTTCCCCT GAAGATAAAA GGCGCCTGCT AGGGGTATTT CTGCTCCAGG ACTGTAAGAA GGACGAAAGC ATGAGGGCCA CTGTCACGGC TATTTAG
|
Protein sequence | MAELYRKLYS NNRLRSAWQS IYENGISSKS PTIRTEIEQF SLSLEKNLRR IADQLREKRY VFSQSYGVAV KKKNNPSKKR PIVISPIPNR IVQRALLDVV QEIPSVRAKL DSGFNFGGIA EIGVPQAILK AYKTALEKPY FIRTDICAFF DNIPRSQALE IITSASKDDD FNTLLTQATT TELSNLITLG RDKELFPLEG KGVAQGSCLS PVLCNLLLDD FDKKMNARGI VCIRYIDDFI LFAPSESKAF KAFASASAFL EKLNLSVYDP RHSPDKAEHG VSNKGFEFLG CSVRPDRIRP SDKSIKRLRD RVNEIFDKVI KKSSSPLRCI NEKTTYKDAL NEVSSTIRGW GNTYSFCTDD HLMINLDRYI SEKILNFNRR YKQKIRAFSP EDKRRLLGVF LLQDCKKDES MRATVTAI
|
| |