| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A0865 |
|---|
| Symbol | prpB |
|---|
| ID | 3784435 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosospira multiformis ATCC 25196 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007614 |
|---|
| Strand | + |
|---|
| Start bp | 983684 |
|---|
| End bp | 984583 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637810947 |
|---|
| Product | 2-methylisocitrate lyase |
|---|
| Protein accession | YP_411560 |
|---|
| Protein GI | 82701994 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
|---|
| TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.698029 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGCCT CTGCCGGTTC CCGTTTTCGC GCAGCGCTTG ACGCGGAAAT GCCCCTGCAG
ATCGCAGGCT GCATCAATGC GTATGCCGCT CGCATGGCAG AGCGTATCGG CTTCAGGGCA
TTGTATCTCT CGGGTGGAGG GGTGGCTGCG GCATCTCTCG GAGTACCCGA TCTTGCCATT
TCCACCCTTG AGGATGTGCT GGTCGACGTG CGGCGCATTA CCGATATCAC GGATCTGCCG
TTGCTGGTGG ACGCGGATAC CGGTTTTGGC GGTGTTCTCA ATATCGGCCG TACTGTGAAA
TCATTGATAA AAGCCGGGGC TGGCGCGCTC CATATCGAAG ATCAGGTGCA GGTCAAGCGT
TGCGGTCACC TTCCAGGCAA GGCTGTGGTC AGTGAAATGG AAATGATGGA ACGGATTGGC
GCTGCGGTGG ATGCAAGAAT CGATCCCGCT TTCGTCATCA TGGCGCGTAC GGATGCACTC
GCGGTGGAGG GACTGCAAGC CGCCATTGAT CGGGCCTGTG CTTATGTGGA GGCGGGCGCG
GACATGATCT TCCCCGAGGC CGTGGCTGAC CTGCAAACCT ACCGGCGCTT TGCGGCAGCG
GTCAAGGTGC CCATCCTGGC CAACATTACG GAATTCGGCG CAACTCCCCT CTATACAGTC
AAGGAGTTGG CCCAGGCAGA TGTTTCCCTG GTGCTTTATC CACTTTCCGC ATTTCGCGCC
ATGAGTGCCG CTGCGTTGAA TGTATATCGA ACAATACGCG CGGAAGGCTC GCAAAAAAGC
GCGCTCCCGA GCATGCAGAC CCGTGCCGAG TTGTATGAAT TTCTCGACTA CCGTGCCTAT
GACGAGAAGC TGAATCTTCT GTTCAAGCCC GAAAAACCGG AAGAACCTGA AAATGAATGA
|
|---|
| Protein sequence | MPASAGSRFR AALDAEMPLQ IAGCINAYAA RMAERIGFRA LYLSGGGVAA ASLGVPDLAI
STLEDVLVDV RRITDITDLP LLVDADTGFG GVLNIGRTVK SLIKAGAGAL HIEDQVQVKR
CGHLPGKAVV SEMEMMERIG AAVDARIDPA FVIMARTDAL AVEGLQAAID RACAYVEAGA
DMIFPEAVAD LQTYRRFAAA VKVPILANIT EFGATPLYTV KELAQADVSL VLYPLSAFRA
MSAAALNVYR TIRAEGSQKS ALPSMQTRAE LYEFLDYRAY DEKLNLLFKP EKPEEPENE
|
|---|
| |