| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A0828 |
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| Symbol | |
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| ID | 3786697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosospira multiformis ATCC 25196 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007614 |
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| Strand | + |
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| Start bp | 941374 |
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| End bp | 943491 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637810912 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_411525 |
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| Protein GI | 82701959 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.263072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGGCTGC CCGCATTCTT CGCTGTTTTC AATAGCAAGG AAACAAGAAA GGCACTGGAG
GAAAAAACAG CGGAATTTAG CCGCTCGCTT TCGCTGTGCA AAGCCACCGT GGAGTTGACG
GCTGAAGGGC TCCTGGTGAC CGACAGGGTG GGCCGCGTGC TCTACCATAA CCAGTTTTAT
CTGGAGATGT GGCCGATTCC CGAGGAGTTC ATGGATAATA TGTCACACCA GGCAATTGTC
CAGTATGGTT CGAGCCAATT AAAAGAGCCA CAACGATTCC TGCACGCGAC TGAGGAAATC
TATCACGCAT GGCCGCCTGA AAGCCTTGAC CTCCTTCAGT TTAACGATTG CCGGATATTT
GAACGCTATA CCAAGGCCAA AGTCCTGGAG GGGCAAAACA TGGTGCGCGT CTGGAGCTTG
AGAAACATTA CGGAACGAAG GGAGGCGGAT GCCTACAAAG CGCAGCTGGC GGCAATTGTC
GAGTCCTCCA ACGATGCGAT CATTGTCCAG GACCTCAACG GCATTATCAC CAGCTGGAAT
GCCGGGGCAG AGGGGCTTTT CGGGTATCGT GCCAGCGAGG TAATAGGCTC TTCCGTAGAG
ATACTCATTC CTCCGGACCT CCGGGAAGAA GAGGGAGATA TCATGTGCCT CATCAAAAGC
GGAAGACGCG CGGATCATTT TGAAACCGTG CGATGGGGAA AGGGCAGAAA ACCAATTGAT
GTCTCGGTCA CGATATCGGC AATGAAGGAT AGGGCCGGTA ATATCATCGG CGCATCCAAA
ATAGTGCGAG ACATCACCCA ACGCAAGGAA TCGCAGGAAC GCATCGAGTA TCTGGCCCAT
TACGACTCGC TGACCGGGTT GCCTAACCGG ACGCTGCTCT CCGATCGCCT CAGGATTGCG
ATCGAGAACG CGAGGCGGTA TTCCATACGA TTGGCGCTGC TGTTCGTGGA CATTGACCGT
TTCAAGCTGG TCAACGATTC GCTTGGCCAT GAGATTGGCG ACAAGCTGCT CAAGGCAGTC
GCACAGCGAA TGCAATCCAC AGTGCGCCAG GCTGATACGG TGAGCCGGGT AGGGGGTGAT
GAATTTGTTG TCCTGCTAAG CCGGATCGAA ACAGCGACGG ATGCGGCGCG AAGCGCGGAA
AAGCTTATTA CCTCAATCTC CCAGCCCTAT CAAATAGAAG AGCATGAGTT ATTACTGACT
GCGAGCATCG GGATCAGCAT TTATCCAGAC AATGGCAAGG ATGCGAGCAG TCTGACGCGC
AATGCGGATG CCGCGATGTA CTCGGCCAAA GGGCAGGGCA GGAACCGCTA TCAGTTCTAT
TCTGAGGACT TGACTTATGC CGCGGCTGAA CGGCTCAGAC TTGAGCACGA CTTGCGAGGG
GCACTTTCGC GTGATGAAAT TTTCCCGCTA TATCAGCCTC AGATAGAGCT TGCCACGGGA
CGGGTCATCG GCGTGGAGGC CCTCATGCGC TGGAACCGGG CGGGGCAGGG GTTGATCTCT
CCTGCAAGCT TTATTCCTGT AGCCGAGGAC AGTGGTCTAA TCCTCGCTCT CGGTGAATAC
ATCCTGAGAA AAGCCTGCCT GCAGGCGCGC CAATGGCACG AACATCAGGG ATTCCAAGGA
ACGATTGCGG TAAATGTTTC AGCGGTGCAG TTTCGCCAGA ACGATTTCAC GGATGTTGTG
TTGCGCGTCC TTTCCGAAAC GGGTTTTCCG CCTGAATGCC TCGAACTGGA AGTCACCGAG
AGCGTCGTGA TGCAGGGATT GGAATCGGTG GTGCAGAAGA TGGGCATTCT TGAATCGCAT
GGTATAAAAC TGGCCATCGA CGATTTTGGC ACTGGCTATT CCAGCTTGTC CTATTTGCGG
CAGTTTGCCA TTGACCGGCT AAAAATAGAC CAATCCTTTG TTCGTGACCT GCCGGGGGAT
GCGGATGCGC AGGCGATTAT CCGCGCCATA GTTGCGATGG GGCGCAGCCT GGGCTTACGG
GTGATGGCAG AAGGCGTGGA GACGGAAGCG CAGGCCCGAT TTCTGCAGGA CATCGAGTGC
ACGGAAAGCC AGGGCTATCT CTATGCAAGG CCAATGAAGT CAAATGATTT TGAAGCCTGG
CTAAAAACCA GGAATTAG
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| Protein sequence | MRLPAFFAVF NSKETRKALE EKTAEFSRSL SLCKATVELT AEGLLVTDRV GRVLYHNQFY
LEMWPIPEEF MDNMSHQAIV QYGSSQLKEP QRFLHATEEI YHAWPPESLD LLQFNDCRIF
ERYTKAKVLE GQNMVRVWSL RNITERREAD AYKAQLAAIV ESSNDAIIVQ DLNGIITSWN
AGAEGLFGYR ASEVIGSSVE ILIPPDLREE EGDIMCLIKS GRRADHFETV RWGKGRKPID
VSVTISAMKD RAGNIIGASK IVRDITQRKE SQERIEYLAH YDSLTGLPNR TLLSDRLRIA
IENARRYSIR LALLFVDIDR FKLVNDSLGH EIGDKLLKAV AQRMQSTVRQ ADTVSRVGGD
EFVVLLSRIE TATDAARSAE KLITSISQPY QIEEHELLLT ASIGISIYPD NGKDASSLTR
NADAAMYSAK GQGRNRYQFY SEDLTYAAAE RLRLEHDLRG ALSRDEIFPL YQPQIELATG
RVIGVEALMR WNRAGQGLIS PASFIPVAED SGLILALGEY ILRKACLQAR QWHEHQGFQG
TIAVNVSAVQ FRQNDFTDVV LRVLSETGFP PECLELEVTE SVVMQGLESV VQKMGILESH
GIKLAIDDFG TGYSSLSYLR QFAIDRLKID QSFVRDLPGD ADAQAIIRAI VAMGRSLGLR
VMAEGVETEA QARFLQDIEC TESQGYLYAR PMKSNDFEAW LKTRN
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