Gene Nmul_A0828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmul_A0828 
Symbol 
ID3786697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosospira multiformis ATCC 25196 
KingdomBacteria 
Replicon accessionNC_007614 
Strand
Start bp941374 
End bp943491 
Gene Length2118 bp 
Protein Length705 aa 
Translation table11 
GC content54% 
IMG OID637810912 
Productdiguanylate cyclase/phosphodiesterase 
Protein accessionYP_411525 
Protein GI82701959 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.263072 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGGCTGC CCGCATTCTT CGCTGTTTTC AATAGCAAGG AAACAAGAAA GGCACTGGAG 
GAAAAAACAG CGGAATTTAG CCGCTCGCTT TCGCTGTGCA AAGCCACCGT GGAGTTGACG
GCTGAAGGGC TCCTGGTGAC CGACAGGGTG GGCCGCGTGC TCTACCATAA CCAGTTTTAT
CTGGAGATGT GGCCGATTCC CGAGGAGTTC ATGGATAATA TGTCACACCA GGCAATTGTC
CAGTATGGTT CGAGCCAATT AAAAGAGCCA CAACGATTCC TGCACGCGAC TGAGGAAATC
TATCACGCAT GGCCGCCTGA AAGCCTTGAC CTCCTTCAGT TTAACGATTG CCGGATATTT
GAACGCTATA CCAAGGCCAA AGTCCTGGAG GGGCAAAACA TGGTGCGCGT CTGGAGCTTG
AGAAACATTA CGGAACGAAG GGAGGCGGAT GCCTACAAAG CGCAGCTGGC GGCAATTGTC
GAGTCCTCCA ACGATGCGAT CATTGTCCAG GACCTCAACG GCATTATCAC CAGCTGGAAT
GCCGGGGCAG AGGGGCTTTT CGGGTATCGT GCCAGCGAGG TAATAGGCTC TTCCGTAGAG
ATACTCATTC CTCCGGACCT CCGGGAAGAA GAGGGAGATA TCATGTGCCT CATCAAAAGC
GGAAGACGCG CGGATCATTT TGAAACCGTG CGATGGGGAA AGGGCAGAAA ACCAATTGAT
GTCTCGGTCA CGATATCGGC AATGAAGGAT AGGGCCGGTA ATATCATCGG CGCATCCAAA
ATAGTGCGAG ACATCACCCA ACGCAAGGAA TCGCAGGAAC GCATCGAGTA TCTGGCCCAT
TACGACTCGC TGACCGGGTT GCCTAACCGG ACGCTGCTCT CCGATCGCCT CAGGATTGCG
ATCGAGAACG CGAGGCGGTA TTCCATACGA TTGGCGCTGC TGTTCGTGGA CATTGACCGT
TTCAAGCTGG TCAACGATTC GCTTGGCCAT GAGATTGGCG ACAAGCTGCT CAAGGCAGTC
GCACAGCGAA TGCAATCCAC AGTGCGCCAG GCTGATACGG TGAGCCGGGT AGGGGGTGAT
GAATTTGTTG TCCTGCTAAG CCGGATCGAA ACAGCGACGG ATGCGGCGCG AAGCGCGGAA
AAGCTTATTA CCTCAATCTC CCAGCCCTAT CAAATAGAAG AGCATGAGTT ATTACTGACT
GCGAGCATCG GGATCAGCAT TTATCCAGAC AATGGCAAGG ATGCGAGCAG TCTGACGCGC
AATGCGGATG CCGCGATGTA CTCGGCCAAA GGGCAGGGCA GGAACCGCTA TCAGTTCTAT
TCTGAGGACT TGACTTATGC CGCGGCTGAA CGGCTCAGAC TTGAGCACGA CTTGCGAGGG
GCACTTTCGC GTGATGAAAT TTTCCCGCTA TATCAGCCTC AGATAGAGCT TGCCACGGGA
CGGGTCATCG GCGTGGAGGC CCTCATGCGC TGGAACCGGG CGGGGCAGGG GTTGATCTCT
CCTGCAAGCT TTATTCCTGT AGCCGAGGAC AGTGGTCTAA TCCTCGCTCT CGGTGAATAC
ATCCTGAGAA AAGCCTGCCT GCAGGCGCGC CAATGGCACG AACATCAGGG ATTCCAAGGA
ACGATTGCGG TAAATGTTTC AGCGGTGCAG TTTCGCCAGA ACGATTTCAC GGATGTTGTG
TTGCGCGTCC TTTCCGAAAC GGGTTTTCCG CCTGAATGCC TCGAACTGGA AGTCACCGAG
AGCGTCGTGA TGCAGGGATT GGAATCGGTG GTGCAGAAGA TGGGCATTCT TGAATCGCAT
GGTATAAAAC TGGCCATCGA CGATTTTGGC ACTGGCTATT CCAGCTTGTC CTATTTGCGG
CAGTTTGCCA TTGACCGGCT AAAAATAGAC CAATCCTTTG TTCGTGACCT GCCGGGGGAT
GCGGATGCGC AGGCGATTAT CCGCGCCATA GTTGCGATGG GGCGCAGCCT GGGCTTACGG
GTGATGGCAG AAGGCGTGGA GACGGAAGCG CAGGCCCGAT TTCTGCAGGA CATCGAGTGC
ACGGAAAGCC AGGGCTATCT CTATGCAAGG CCAATGAAGT CAAATGATTT TGAAGCCTGG
CTAAAAACCA GGAATTAG
 
Protein sequence
MRLPAFFAVF NSKETRKALE EKTAEFSRSL SLCKATVELT AEGLLVTDRV GRVLYHNQFY 
LEMWPIPEEF MDNMSHQAIV QYGSSQLKEP QRFLHATEEI YHAWPPESLD LLQFNDCRIF
ERYTKAKVLE GQNMVRVWSL RNITERREAD AYKAQLAAIV ESSNDAIIVQ DLNGIITSWN
AGAEGLFGYR ASEVIGSSVE ILIPPDLREE EGDIMCLIKS GRRADHFETV RWGKGRKPID
VSVTISAMKD RAGNIIGASK IVRDITQRKE SQERIEYLAH YDSLTGLPNR TLLSDRLRIA
IENARRYSIR LALLFVDIDR FKLVNDSLGH EIGDKLLKAV AQRMQSTVRQ ADTVSRVGGD
EFVVLLSRIE TATDAARSAE KLITSISQPY QIEEHELLLT ASIGISIYPD NGKDASSLTR
NADAAMYSAK GQGRNRYQFY SEDLTYAAAE RLRLEHDLRG ALSRDEIFPL YQPQIELATG
RVIGVEALMR WNRAGQGLIS PASFIPVAED SGLILALGEY ILRKACLQAR QWHEHQGFQG
TIAVNVSAVQ FRQNDFTDVV LRVLSETGFP PECLELEVTE SVVMQGLESV VQKMGILESH
GIKLAIDDFG TGYSSLSYLR QFAIDRLKID QSFVRDLPGD ADAQAIIRAI VAMGRSLGLR
VMAEGVETEA QARFLQDIEC TESQGYLYAR PMKSNDFEAW LKTRN