Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmul_A0791 |
Symbol | rpsD |
ID | 3785244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosospira multiformis ATCC 25196 |
Kingdom | Bacteria |
Replicon accession | NC_007614 |
Strand | + |
Start bp | 907498 |
End bp | 908124 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637810877 |
Product | 30S ribosomal protein S4 |
Protein accession | YP_411490 |
Protein GI | 82701924 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0522] Ribosomal protein S4 and related proteins |
TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.068053 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCGAGAA ATCTTGATCC CAAATGCCGT CAATGCCGAC GTGAGGGTGA GAAGCTGTTC CTTAAAGGTG AGAAATGTTT TACCGATAAG TGTGCCATCG AGCGCCGGAA TTACGCGCCT GGGCAACACG GTCAGAAAAG TGGCCGTTTA TCGGACTACG GAGTGCAATT ACGCGAAAAG CAGAAGCTGC GCCGAATATA TGGAGTGCTG GAGCGTCAGT TCCGTAATGG TTACGAGCTT GCGGAGAGGC AGCGCGGTGT TACGGGCGAA AATCTCCTAC AATTACTGGA ATGCCGGCTT GACACGGTTT CCTATCGCAT GGGGTTTGGC GCATCGCGGT CCGAAGCGCG TCAGATTGTC CGTCATAACG GGATTCTGGT AAATGGCAGG AGAATCAATA TTCCTTCCTA TCAGGTAAAA CCGGGAGATG TTATAGAAGT TGCAGAGAAG GCAAAGAATC ATTTGCGTAT CAAGGCGTCC GTGGAAGCTG CCGAACAGCG GCACTTTCCG GAATGGCTGG AGGTGGACAC TAAAGCCATG AAGGGAACTT TCAAGAACAA ACCCGAGAGA TCCGATTTAC CGTCAAGCAT CAATGAATCT CTCGTAATTG AATTGTATTC CAAGTAA
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Protein sequence | MARNLDPKCR QCRREGEKLF LKGEKCFTDK CAIERRNYAP GQHGQKSGRL SDYGVQLREK QKLRRIYGVL ERQFRNGYEL AERQRGVTGE NLLQLLECRL DTVSYRMGFG ASRSEARQIV RHNGILVNGR RINIPSYQVK PGDVIEVAEK AKNHLRIKAS VEAAEQRHFP EWLEVDTKAM KGTFKNKPER SDLPSSINES LVIELYSK
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