| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A0722 |
|---|
| Symbol | |
|---|
| ID | 3786068 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosospira multiformis ATCC 25196 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007614 |
|---|
| Strand | + |
|---|
| Start bp | 837372 |
|---|
| End bp | 840164 |
|---|
| Gene Length | 2793 bp |
|---|
| Protein Length | 930 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637810804 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_411421 |
|---|
| Protein GI | 82701855 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3857] ATP-dependent nuclease, subunit B |
|---|
| TIGRFAM ID | [TIGR03623] probable DNA repair protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.851206 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCCA TTCCTCATTC TCTACAAATT CCTTTCCCCG AAGTTGTTGT AAACCGTATC
GCCGGATTGA AAGCCGGCGA TACGGTGGTG ACTCCCAACA CGCGGCTCGC CATCACCCTC
AGGCGCGAGT TCGATCGAAT CCAGGCAGCG CAAGGAATTT CTGCCTGGGC TGCAGCCGAC
ATTCTGCCCG TTTCCGCATT TATCGAGCGC ATCTACGAAG ATGCGCTTTA TTCCACTCAT
GCATCTCATC TGCCCCAGCT GCTTACATCT GCACAGGAGC AGTTCTTGTG GGAGGAGGTT
GTCGTCCAAT CGGCCGCTCC CCTCTTGCTC TCGGTGGCAG AAAGCGCACG GTTGGCCCGG
GAGGCGTGGA GGCTGGCCCA TGAGTGGCAG TTGCTCCCCC GGTTCGGGAA ATTCGTGTTG
AACGAGGATT GCAGGGCATT CAGCGCCTGG TCGCATCGCT ATAAAAATGT AACCCGCAAG
GCTCGTCAGA TCGACCATGC ACGTCTTTGC ACGCTTGTAA CCGGGTTGTG CGGTTCCCCT
GGTATCGCGA TTCCGCAACG CCTGATTTGT TATGGTTTCG ACAGCGTTAC GCCGCAGTGG
GCTGCGCTGC TGGCAAAGCT TGAGGAAGCG GGTTGCGAGG TCGATGAGAT GACACGAACC
GATCCGGCCG CGCACCGCTT CGAAGTGCCG TACTCCCCAA ACCGGACTGT GCACCGGGTG
GAATGTGACG TCAGCAATGA CGAGATTTAT CAGGCCGCGG TGTGGGCGCG GGCCCGAATC
GAGAAGGATA GCACGGCTCG CGTCGGCATA GTGGTCCCCC CGCTTTCGGA GTACCGGAGT
AGCCTCGTAC GAATCTTTAG CTCGGTGATG GATCCGGATG TCCGTCAAGC CCTTCCCGGC
GTACCGCGGC ATATGCCATT CAACATATCC CTGGGCGTTG CGCTGAGTTC GTATCCGCTG
GTACATACTG CATTCCTTGT GCTTGAGCTT ATCCAGGGAG AAATCGAGTT CGAGCGTGCA
AGCCTCTTGT TACGATCTCC CTTCCTGGCG GGAGCGGAGA CTGAAATGCT TCCCCGCGCA
CGGCTGGATG CAAAATTGCG CAAGCGTGCC GAACCTGTGA TTACACTCGA ACGCCTGCTT
GTACTGGTAA AGCGTGAAAA CAACGCGAAC TGTCCCCTCC TCGTGAAGCT GTTGTGGGAC
TGCGAAAAGT TCTGCAAAAA AATGTCGACA GATGTGCAGC GCCCTTCCAC GCTGGCAAGA
GCAATTTCCG ATATCCTGCA GCTCGTCGGA TTTCCAGGTG AAAGAGCTCC TGACTCTTCA
GAATATCAGA CGCTCAAAAA ATGGCAGGAC GTCCTCGCGG GTTTAGCCCT GCTTGATAAC
GTTACCATCG GCATGAGCTA TCGCCAGGCT ATCTCACATC TGCGCGGGGT GGCTGCCGAT
ACCTTGTTTC AGCCGGAGAC GCCGGATGTT CCCATCCAGA TACTCGGGGT CTTTGAAGCT
GGCGGAATGA TGTTCGATCA TCTCTGGGTG ATGGGATTAT CGGATGAGGC CTGGCCGCTG
CAACCACGCC CGAACCCGTT CCTGCCGATC GAGCTGCAGC GCGCCGAAAG ACTGCCCCTG
GGCTCTCCGG CAGCCACTCT CGAACTTGCG TCCCGTTTTA CGGAGGGATG GCTGGCCGCA
TCGAAGGAAG TTATTCTGAG TCACGCGCGG CATAGCGGAA GCAGTGATAC ACGTGAGCTG
GCGCCAAGTC CGTTGATCGC ACATATTGCT ACCAGCGATA TCAGGCTTTT CGGTCTGCTT
CCGGATTATG TGAAACATCG CGATCTGATT CATCAGGGAC GCCGACTTGA GCGAATAAAG
GATGAGCCGG CGCCCGGGAT AGTCTCTGGC AAAGGAGGAG AGGGCAGAGC CCGCGGCGGG
GTGGCGGTGA TAAAAGACCA GGCCGCCTGT CCATTCCGCG CGTTGGCGCT ACATCGTTTG
CATGCGGAAG GTTTGAAGAC GCCTCATCCT GGACTTGATG CGGGAGAGCG CGGCACGCTG
GTTCACGAGA TGCTTGCCCA GGTATGGGAG CGGATCAAGA ATAAGAGCGC ACTCGACGCT
TTGGCTGAGG ACGAGTTGAG AACGCTGCTG ACCAGTGCCG CGGGGGAAGT CATTGCACGC
ATGAGCGCGA GGCATTCACA TACTTTGTCA GAACGTCTTG CCCGGGTCGA GCAGCGGCGG
CTGGTAAGAT TGGCCCGAGA ATGGCTCGAA GAAGAGAGGA AGCGAGGCGA TTTCACTGTA
GTTTCCACCG AGGCTAGAAA GAGCATCGAA ATCGGCGGGC TTGCATTGGA CACCCGGCTG
GATCGTGTGG ATGAACTCGC CGACGGTCGC CGGATTGTCA TCGACTACAA AACACGGGCG
CCTTCCGTGA ACGCGATGCT GGGGGAGCGC CCGGACGAGC CTCAACTGCC GCTCTATCTT
GTGGCCGCTG AGGTGAACGC TGCAGCCATT GCCTTTGCGC AAGTCAGGGC CGGGGAAATG
CGGTACACCG CGCTTGCCCG CGACAACGAT CTTTTACCGG ACGTAAAAGG GTTTGCGCAA
TCACGCCATA TTGATCGATA TGACTCGTGG GAAGCGCTCG TCGCAGCGTG GTTTGAGGCT
CTTGTAAGCG TCGTTACCGA TTTTTCCAAC GGTCATTCGC AAGTCGACCC CAAGAAATAT
CCACAGACCT GTCGTACATG CGATGTTCAG CCCTTATGTC GCATTTACGA GCGCGCAGCC
ACGGATTTCA CCGCGCAAGG GGAGGAAGAA TGA
|
|---|
| Protein sequence | MSAIPHSLQI PFPEVVVNRI AGLKAGDTVV TPNTRLAITL RREFDRIQAA QGISAWAAAD
ILPVSAFIER IYEDALYSTH ASHLPQLLTS AQEQFLWEEV VVQSAAPLLL SVAESARLAR
EAWRLAHEWQ LLPRFGKFVL NEDCRAFSAW SHRYKNVTRK ARQIDHARLC TLVTGLCGSP
GIAIPQRLIC YGFDSVTPQW AALLAKLEEA GCEVDEMTRT DPAAHRFEVP YSPNRTVHRV
ECDVSNDEIY QAAVWARARI EKDSTARVGI VVPPLSEYRS SLVRIFSSVM DPDVRQALPG
VPRHMPFNIS LGVALSSYPL VHTAFLVLEL IQGEIEFERA SLLLRSPFLA GAETEMLPRA
RLDAKLRKRA EPVITLERLL VLVKRENNAN CPLLVKLLWD CEKFCKKMST DVQRPSTLAR
AISDILQLVG FPGERAPDSS EYQTLKKWQD VLAGLALLDN VTIGMSYRQA ISHLRGVAAD
TLFQPETPDV PIQILGVFEA GGMMFDHLWV MGLSDEAWPL QPRPNPFLPI ELQRAERLPL
GSPAATLELA SRFTEGWLAA SKEVILSHAR HSGSSDTREL APSPLIAHIA TSDIRLFGLL
PDYVKHRDLI HQGRRLERIK DEPAPGIVSG KGGEGRARGG VAVIKDQAAC PFRALALHRL
HAEGLKTPHP GLDAGERGTL VHEMLAQVWE RIKNKSALDA LAEDELRTLL TSAAGEVIAR
MSARHSHTLS ERLARVEQRR LVRLAREWLE EERKRGDFTV VSTEARKSIE IGGLALDTRL
DRVDELADGR RIVIDYKTRA PSVNAMLGER PDEPQLPLYL VAAEVNAAAI AFAQVRAGEM
RYTALARDND LLPDVKGFAQ SRHIDRYDSW EALVAAWFEA LVSVVTDFSN GHSQVDPKKY
PQTCRTCDVQ PLCRIYERAA TDFTAQGEEE
|
|---|
| |