| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A0692 |
|---|
| Symbol | |
|---|
| ID | 3786154 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosospira multiformis ATCC 25196 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007614 |
|---|
| Strand | - |
|---|
| Start bp | 798903 |
|---|
| End bp | 800141 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637810774 |
|---|
| Product | secretion protein HlyD |
|---|
| Protein accession | YP_411391 |
|---|
| Protein GI | 82701825 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000417324 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCCA TCCAGGATTA TAAAAACAAA CCCGGCAACT CGTTAATGTG CAGCCAAATA
AAAATGCCTG ACTTACTGTA TGCTACCGCG CGGCTCGCCC TAAGCGTTGC TGCAAGCGTC
GCCTTGGGCG TTATGGTGTC GAGCTGTGGC AAGAAGCCAG AAACACCTCC TCCCCCCGCC
CTTCCCGTAA GTGTAATCGA GGTTCACCCT ACCAGCGTAC CGATCAGTGC CGAAGCCGTG
GCCCAGACCG AAGGCGCCAA GGAGGTCGAA ATACGTCCCC GGGTGGGGGG CATTCTGCTC
AAACGCCTGT ATGAGGAAGG TGCAGAGGTA AAAGCAGGTC AACCTCTGTT TCTGATTGAT
CCCGTACCTT ACCGATATGC GCTTGCGCAG GCGAAGGCCC AACTGGCAGA ACAGAAAGCC
CGTATCATTC AGACCGGACG CGAAGAAAAA CGCCTGAAAG ACCTGCTGGA GACGCAGGCA
ATCAGTCAGC GCGAGTATGA TAACGCGGTC TCCGATAACG CGATTGCGCA CGCCGCCTTG
CAGCAGGCCG AAGTGCGCGT GCGCGACGCC GAACTCAGCC TCTCCTATAC CTCTGTAACC
GCGCCTGTCA ACGGTATTTC GGGCCGCTTC CAGTTTTCGG AAGGCGCCCT GGTGGAAGCG
AACAGCAGCC TTTTGACCAC GCTGGTGCAA TTGTCGCCGA TCTGGGTGCG TTTCAGCCTG
TCGAATAACG AACTGATGCA GCTCGGCGGC CCCCTGAACG AGAAAAAAGT AAAACAAGTG
ACCCTGATAT TGCCGGACGG CTCAGAATAC GAAAAGAAAG GGGAGTTGAA TTTCGCCGCC
AGCCAGATCG ACCCGCTGCT GGGCACGCAG CAACTGCGCG CCACGTTCGA AAATGCGGAA
CAGCGATTGC TGCCGGGTCA GTTTGTCAGA GCGAAAGTGG TCGTTGGCCA GCGTGACGGG
GTATTTCTCG TCCCTCAGAA TGCAATACAA ACCTCTGACC GCGGTCAGTC AGTGTATGTG
ATCAATGAGA AAAACGAAGC GACTCCGCAG GCAGTGGTTA CCGGGAAGTG GATGGGTACG
GACTGGGTAA TTCTTGACGG ACTCAAAGCC GGGGATAAAG TCATTGTCGA TAATATCATC
AAGCTTCGCC CCGGGGCGCC CGTTACCCCT CACGCGCCCG GAGAAACGCC GGGAACACCT
CCTGCCCAGC CTGATTCCGG CTCCGGCAAA GCCGCTTGA
|
|---|
| Protein sequence | MTAIQDYKNK PGNSLMCSQI KMPDLLYATA RLALSVAASV ALGVMVSSCG KKPETPPPPA
LPVSVIEVHP TSVPISAEAV AQTEGAKEVE IRPRVGGILL KRLYEEGAEV KAGQPLFLID
PVPYRYALAQ AKAQLAEQKA RIIQTGREEK RLKDLLETQA ISQREYDNAV SDNAIAHAAL
QQAEVRVRDA ELSLSYTSVT APVNGISGRF QFSEGALVEA NSSLLTTLVQ LSPIWVRFSL
SNNELMQLGG PLNEKKVKQV TLILPDGSEY EKKGELNFAA SQIDPLLGTQ QLRATFENAE
QRLLPGQFVR AKVVVGQRDG VFLVPQNAIQ TSDRGQSVYV INEKNEATPQ AVVTGKWMGT
DWVILDGLKA GDKVIVDNII KLRPGAPVTP HAPGETPGTP PAQPDSGSGK AA
|
|---|
| |