| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A0688 |
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| Symbol | |
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| ID | 3784065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosospira multiformis ATCC 25196 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007614 |
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| Strand | - |
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| Start bp | 789801 |
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| End bp | 792974 |
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| Gene Length | 3174 bp |
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| Protein Length | 1057 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637810770 |
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| Product | hydrophobe/amphiphile efflux-1 HAE1 |
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| Protein accession | YP_411387 |
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| Protein GI | 82701821 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.67862 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTCCC GCTTTTTTAT CGATCGTCCA ATTTTCGCAT CCGTCCTGTC CATCATTATT
GTGGTGGTGG GACTCGTTGC GCTGAGAAAC CTCCCAATTG CGCAGTTTCC GGAAATCACG
CCGCCCATGG TGCAGATCGA TGCCGATTAC CCCGGGGCGA GCGCGGAAGT TGTTGCGGAA
TCTGTCGCGC GCCCCATCGA GGTCCAGCTT CCAGGTATCG ATAATCTTCT TTATTACGAA
TCCACTAGCT CGAACGACGG GCACATGACC ATGAAGCTCA CGTTCGAGAT CGGAACGGAC
GTGGATATCG CGCAGGTCCA GACGCAGAAC AGGCAGCGCC TAGCCGAACC GCAACTTCCG
GACGAAGTCG TGCGCCAGGG TATAACCGTG AAAAAAACGT CGCCTGATCT TCTGGCGGTC
ATTGCCCTGA GTTCTTCCGA CCCGCGGCAC GATACCATTT ACCTCTCGAA TTATGCCTTG
CTGCGGGTTC TCGATAACGT CAAGCGTCTT CCGGGCGTAG GAGATGCCAT TATCTTCGGC
AGCCAGAATT ACTCCATGCG GCTGATCCTG GATCCTGTCC GCATGGCGCA ACTGGACCTC
ACTCCCACCG ATATCGCGGC GGTGGTCCGC GAGCAGAACC GGGATTTTCC CGCCGGCAGG
ATAGGACGGG AGCCTTCGCC GAAAGGAACG GAGCTTACCA TCCCGGTCAT TACCCAGGGC
CGCATGAGCG AAGTGAAGGA ATTCGAGGAT ATGATCGTAA GGGCGTATCC CGACGGTTCC
ATGGTGCGAT TGCGGGATGT AGCGAGAGTG GAGCTGGGTG CGCAATCGTA TGATCTGGAA
GGGAGATGGA ACGGAAAGCC CAACACCTTT CTTCTGACCT TTCTGGCCCC CGGCGCCAAC
GCGCTCGATA CGGTTCACCG GGTACGCCAG GAAATGGACA AGCTCGCGCG CAGTTTCCCC
GCCGGCGTCT CCTACGACAT ACCCTATGAC ACTACCATAT TCATCGAAGT TTCCATCAAG
GAAGTCCTGA AGACGCTGGT CGAAGCAACG CTTCTTGTCA TACTGGTCGT TTTTGTTTTT
CTGCAAAGCT GGAGGGCAAC GATCATTCCA GCGGTCGCGG TTCCTATTTC ACTGATCGGA
ACCCTGGCCG GAATGGCAGC GCTTGGATTT TCAATCAATA CCCTTACCCT GTTCGGCATG
GTGCTTGCCA TCGGGATCGT GGTGGATGAT GCGATCGTGG TGGTGGAAAA TGTCGAGCGG
CATATGCGGG AGGGGTTGCC GCCCAGGGAG GCGGCCAGGG TGGCCATGGA TGAAGTGGCG
GGCCCCGTCA TTGCCATCGT CCTGGTGCTG GGCGCGGTGT TTGTTCCAGT CGCTTTTCTG
GGCGGAATCA CCGGTGAATT GTACAAACAG TTTGCGATTA CCATTGCCCT GTCCGTCGCG
ATATCGGGTT TTGTGGCGCT TACCCTGAGC CCCGCGCTCT GTGCGCTTAT TCTCAAGCCG
GGGCATGGGG AGCCCGCAAA GTACTGGAAG CTGTTCAACC GCTCGTTTGA CTGGATGCAG
ACACGCTATA CAAATGGCGT CGGAATGGTA TTGAAACGAT CCATGATCGC TCTCTGTATT
TTTGCCGTGA TGATATTCGT CCTCCTTGGC TTGTTCAGAA CGATCCCGGG CAGCTTTCTC
CCGGAAGAAG ACCAGGGCTA TTTCATTACC GTTGTCCAGT TGCCGGACGG AGCCTCCAAG
GAACGCACGA TTGATGTATT GAGCAAAGTA GAGCAATACT TCCTGTCGAT TCCCGCGGTA
CACTCAACGG ATGCGCTGGC CGGCCAGAAC TTCGTGTTCG GCACGCGGGG AGCGAATCAG
GCGACGATGT TCGTTCCGCT GCAGTCTTGG GACACGCGCA AGAGTGCCGG GGAGCATGTC
ACCGGCCTTA TCGCATCCGC CTTCCAGGAG TTTGCAAAGA TACCGGAAGC ACTGATTCTT
GCCTTCAATG CCCCATCCAT CAGAGGCCTG GGTTCCACCG GGGGTTTTTC CCTGCAGGTA
CAGGATCCGA GCGGGGGCGA TTTCAAAGAG TTTGCCGAGA TTACGCAGAA ATTCGTCGCC
AAGGCTGTGG AACATCCTGC TATCGCTGCT GCCAGCACCA ATTTTCGCGT CAGTGCCCCC
CGGCTTTATG CCCGCGTTGA CCGGGAACGC GCCAAAGCGC TGGGCGTGCC GATTTCCGAA
GTCTTCGACA GCATGCAGGC TTATTTCGGC AACCTGTATA TCAACGACTT CGTGAAATAT
GGTCGTATCT ATCGCGTCCA GACGGAAGCG CAGCCTCAGT ACCGATCAAG GCCGGAGGAT
ATCGAGAAAA TTTACGTGCG TGCGCGGAAC GACAAGGGCC ACGTCATGAT TCCACTGAAT
TCGGTGATCA CCACCGAATT CACCAGCGGA CCTGATCCCG TCACCCACTT CAACGGATTC
AATTCCGCAC TCGTGCTGGG CGGCGCCGCT TCCGGCTACA GCTCGGGGCA GGCCCTCGAT
GCGCTGGAAC AGATCGCAGA TGAGATATTG GCGCCAAAAG GTTATACGAT CGACTGGAGT
GGAATATCCT TTCAGGAGCG CCAGGCAGGA GGGAAATCGG TTCTGGTATT CGCCTTCGCC
CTGCTCATGG TCTTTCTGGT GCTGGCCGCC CTTTACGAAA GCTGGTCAGT TCCGCTCGCG
GTGATTCTTG CAATTCCGTT CGGAATTTTA GGCGCATTAC TGGCTATCTG GGTTCGCGAA
TTGACCAACG ACATCTATTT CCAGATCGGG CTGGTGACAT TGATCGGATT ATCCGCGAAG
AACGCCATCC TGATCGTGGA ATTCGCCAAT CAGCGTTATG CGAACGGGGA GCCTTTGCTC
GACGCGGCGA TGGAGGCCGC CCGGCTACGT TTCCGTCCCA TTATCATGAC CTCCATGGCT
TTTATCCTGG GGGTGTTTCC GCTGGTGATC GCTTCCGGCG CAGGGGCCGC CAGCCGGAAT
TCCATCGGGA CGGGTGTTTT CGGGGGGATG CTGGCTGCGA CCTTTCTTGC CATCTTTTTC
GTACCTCTCT TTTTCGTAGT AATAAGAAAA ATGACGCATC GGCGCGGACA GCCAGAGGTT
CGAGCATCCC ATGCGGCGCC GGATAATTCT CCTTCCACCG TCGAAGACGA ATAA
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| Protein sequence | MSSRFFIDRP IFASVLSIII VVVGLVALRN LPIAQFPEIT PPMVQIDADY PGASAEVVAE
SVARPIEVQL PGIDNLLYYE STSSNDGHMT MKLTFEIGTD VDIAQVQTQN RQRLAEPQLP
DEVVRQGITV KKTSPDLLAV IALSSSDPRH DTIYLSNYAL LRVLDNVKRL PGVGDAIIFG
SQNYSMRLIL DPVRMAQLDL TPTDIAAVVR EQNRDFPAGR IGREPSPKGT ELTIPVITQG
RMSEVKEFED MIVRAYPDGS MVRLRDVARV ELGAQSYDLE GRWNGKPNTF LLTFLAPGAN
ALDTVHRVRQ EMDKLARSFP AGVSYDIPYD TTIFIEVSIK EVLKTLVEAT LLVILVVFVF
LQSWRATIIP AVAVPISLIG TLAGMAALGF SINTLTLFGM VLAIGIVVDD AIVVVENVER
HMREGLPPRE AARVAMDEVA GPVIAIVLVL GAVFVPVAFL GGITGELYKQ FAITIALSVA
ISGFVALTLS PALCALILKP GHGEPAKYWK LFNRSFDWMQ TRYTNGVGMV LKRSMIALCI
FAVMIFVLLG LFRTIPGSFL PEEDQGYFIT VVQLPDGASK ERTIDVLSKV EQYFLSIPAV
HSTDALAGQN FVFGTRGANQ ATMFVPLQSW DTRKSAGEHV TGLIASAFQE FAKIPEALIL
AFNAPSIRGL GSTGGFSLQV QDPSGGDFKE FAEITQKFVA KAVEHPAIAA ASTNFRVSAP
RLYARVDRER AKALGVPISE VFDSMQAYFG NLYINDFVKY GRIYRVQTEA QPQYRSRPED
IEKIYVRARN DKGHVMIPLN SVITTEFTSG PDPVTHFNGF NSALVLGGAA SGYSSGQALD
ALEQIADEIL APKGYTIDWS GISFQERQAG GKSVLVFAFA LLMVFLVLAA LYESWSVPLA
VILAIPFGIL GALLAIWVRE LTNDIYFQIG LVTLIGLSAK NAILIVEFAN QRYANGEPLL
DAAMEAARLR FRPIIMTSMA FILGVFPLVI ASGAGAASRN SIGTGVFGGM LAATFLAIFF
VPLFFVVIRK MTHRRGQPEV RASHAAPDNS PSTVEDE
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