| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A0664 |
|---|
| Symbol | |
|---|
| ID | 3785149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosospira multiformis ATCC 25196 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007614 |
|---|
| Strand | + |
|---|
| Start bp | 759353 |
|---|
| End bp | 760720 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637810746 |
|---|
| Product | peptidase M50, putative membrane-associated zinc metallopeptidase |
|---|
| Protein accession | YP_411363 |
|---|
| Protein GI | 82701797 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
|---|
| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.399038 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATTCC TTTTCACAAT TGCCGCTTTC GTTGTTGCTC TCGGCCTGCT GATCGTATTT
CATGAATTCG GCCATTACCT CGTCGCCCGC TGGTGTGGAG TAAAAGTACT CCGTTTCTCC
ATCGGTTTCG GTCATCCGCT CATGCGGAAG CAGGTGGGAA AAGACCAGAC CGAATGGGTT
ATTGCCGCCT TTCCTCTTGG CGGTTATGTG AAGATGCTCG ATGAACGTGA AGGAACGGTT
GCGCTGGAGG AACTGCCACG TTCATTCAAC CGCCAGCCGG TCTTGCAGCG GTTTGCTATC
GTCGCAGCGG GGCCGGTCGC GAATTTTCTG CTGGCGATCG TCCTTTACTG GCTGTTGTTC
ATGCTCGGCA TCAATGCGAT GAAGCCTGTT CTCGGACCTG TTGCTCCCGC AACTCCGGCG
GCATTTGCCG GCCTGGAGAA GGGCGACACC CTGAGGCGAA TCGAGGGGGA ACCGGTGGAA
ACCTGGCAGG ATGCGCGCTG GCTGCTATTG TCCCACGCCG TGGAAAGGTC TCCTGCACTT
GCGGTGGAAG TGACCGACAT CCATGGTCAG ACCGGGCTGC GGAGGCTGGA TTTGAGCAAC
ATCCAGGCGG ATGATCTGGA TGGGGAGTTT TTAAAGAAAA TCGGCCTCAG CAGTTATCAG
CCCGAGGTTA AACCCGTCAT TTCGCAGGTG ATACCCGATA GTGCCGGAAG CCGCGCCGGG
TTACGGCCGG GCGATGAAAT CCTGGCAGTC AACGGGCTGA AAATTTCCCT GTGGCAAGAC
CTGGTGCAAC AGGTGCGAGA TCGGCCGGAA TCACCGGTCA TGCTGGAAAT CCGGCGTGAC
GGTGCCGTGA TCGACAAGGA GGTTGTTCCC GACAGCGTCA CAGAGAATGG AGAAAAAATC
GGGAAAATTG GGATTGCGCC GCGGATTGAT TCCGATGAGA TCGAAAAGCT GTTGATCGAA
GTACGCTATC CCTTGGGCAC GGCTTTTGCC AAGGCGATAA ACAAAACCTG GGAAACTTCG
AAGTTCACCT TGCAAATGTT CGGAAAAATG CTGGCAGGTG AGGTGTCCTG GAAGAATGTA
AGTGGTCCCA TCACTATTGC CGACTATGCA GGAAAATCTG CCCAGATGGG CCTTTCGCCT
TATCTGGGTT TTCTCGCCCT GATCAGTGTC AGTTTGGGCG TATTGAACCT GCTGCCCATT
CCCGTATTGG ATGGAGGGCA TTTAATGTAT TATGTCATCG AAATCGTCAA GGGCAGTCCG
CTCTCCGCGA AAGCGATGGA AATCGGTCAG CAGGTGGGGA TGGCACTCTT GTTTGCCCTG
ATGGCTTTTG CCATTTATAA CGACATAAAC CGCCTCATCC CCGGTTAA
|
|---|
| Protein sequence | MTFLFTIAAF VVALGLLIVF HEFGHYLVAR WCGVKVLRFS IGFGHPLMRK QVGKDQTEWV
IAAFPLGGYV KMLDEREGTV ALEELPRSFN RQPVLQRFAI VAAGPVANFL LAIVLYWLLF
MLGINAMKPV LGPVAPATPA AFAGLEKGDT LRRIEGEPVE TWQDARWLLL SHAVERSPAL
AVEVTDIHGQ TGLRRLDLSN IQADDLDGEF LKKIGLSSYQ PEVKPVISQV IPDSAGSRAG
LRPGDEILAV NGLKISLWQD LVQQVRDRPE SPVMLEIRRD GAVIDKEVVP DSVTENGEKI
GKIGIAPRID SDEIEKLLIE VRYPLGTAFA KAINKTWETS KFTLQMFGKM LAGEVSWKNV
SGPITIADYA GKSAQMGLSP YLGFLALISV SLGVLNLLPI PVLDGGHLMY YVIEIVKGSP
LSAKAMEIGQ QVGMALLFAL MAFAIYNDIN RLIPG
|
|---|
| |