Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmul_A0639 |
Symbol | |
ID | 3785412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosospira multiformis ATCC 25196 |
Kingdom | Bacteria |
Replicon accession | NC_007614 |
Strand | - |
Start bp | 730434 |
End bp | 733904 |
Gene Length | 3471 bp |
Protein Length | 1156 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637810721 |
Product | transcription-repair coupling factor |
Protein accession | YP_411338 |
Protein GI | 82701772 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATTCA AGCTGACCAT TCCCTCATCC GGATCGACTA TTCGCTACGG TCACTTTGAC GGATCCTCCG ACTCGCTTGC CCTCGCCCAA CTGGCGCTGG AGGCGAAAAA AGCAAAGCCC GTTACCATTA TTACGGCAAG CGCTTTGGCC GCTCAAAGAC TGCTGGAGGA AATACCTTTT TTTGCACCCG AACTGAGAAC CCGGCTGCTG CCGGATTGGG AAACGTTGCC CTACGATACT TTTTCGCCGC ATCAGGACCT CGTTTCCGAA AGACTGGCAA CGCTCTACCA ACTCATGAAT GGCGCTTGCG ACATATTGAT TGTTCCTGTC ACCACGGCCC TGTACCGCAT GCCACCGCCC GAGTACCTGG CGGCACACAC TTTCTTTCTC GCTCGCGGCG AAACCCTTGA CCTGAACGCC TTGCGCAGCC AGATGACCCT GGCTGGCTAC AGCCATGTGA CCCAGGTACT TTCACCGGGG GAATACAGCG TACGTGGGGG ACTGATCGAC CTGTTTCCGA TGGGAAGCCC GTTGCCCTAC AGGATCGACC TGCTCGATAA TGAAATCGAA ACCATCCGGA CCTTTGACGT CGATACCCAG AGAAGCGTTT ATCCGGTCAC CGAGATACGA TTACTGCCGG CGCGCGAGTT TCCTCTCGAT GAGGAAGGCC GTACACGCTT TCGAGGCAGA TTCCGTGAAA AATTCGAGGG AGATCCTTCC AGGAGTCTCA TTTACAAGGA TATCAGCAAG GGTGGCAGTC CCGCAGGTAT CGAATACTAT CTGCCTCTTT TTTTTGAGCA TACGGCGACA CTGTTCGATT ATTTGCCGCA AACAGCGCTG TTGTGCCTGC ATCATGAACT TTACCAAACG GTAGAGAGTT TCTGGCATGA CACGCAGGCG CGCTATCAGC TTCTGCGGGG CGATAGCGAC CGGCCGCTGC TGAAACCCGC AGACTTGTTC CTTACCACGG AAGCATTCTT CGGGGCGTTG AAACCCTACC CGCGCATCGA GATTCCACCG GAAGAACGGG CGACGAAAAC CGGCGGAGCC GAGGTGCAAG GTTTGAGCAT TCCTTTGCCT CCGCTTCAGA TCGATCGTCG CGCCGTGAAT CCGGCGGAAA AACTTTCTGC CTTTATTGCT GAATTCGAAT CCTCCGGAGG GGGAAGAACG TTGCTCCTTG CCGAAAGTCT GGGCAGGCGT GAGTTGATTG CCGATCATTT GAAGCAGTAT AGGCTCAATC CCGACATATG CGACAACTAT GCGCAATTTC GCGCAAGCAC TAGCCCCTTC GTGCTCGGTG TGGGGCCGCT GCACAACGGC TTCATATACC CGGAAAAGGG AATAGCCTTT GTAACCGAAA GCGAGCTCTA TGCCAGACAC CTGCACGGCC GGGGTGAACG GGATTCGCGC AAAACCAGCG CGGTCGCCGA TGCCGTTCTG CGCGATCTGT CCGAGATCAA GGCGGGCGAT CCCGTCGTCC ATGAACAACA CGGCATAGGC CGTTATCTCG GGCTCGTCAG CATGGATCTG GGAGAAGGCG AAACGGAGTT TCTGTCGCTG GAATACGCCA GTGGTGACAA ATTGTATGTA CCTGTCTCGC AACTGCATCT TATCGGACGA TACAGCGGCG CTTCACCGGA ATCCGCGCCC CTGCATAAAC TGGGTAGCGG CCAGTGGGAT AAGGCCAAGC GCAAGGCGAT GCAGCAGGTA CGCGATACCG CGGCCGAACT GCTCAACATC TATGCCCAGC GCGCCGCCCG TGTTGGCCAC GCATTTCGCC TGAAAGAGCA GGATTACGAG GCGTTCGTCG AAGGTTTCGG ATTCGAGGAG ACGCCGGATC AGGCGACTGC CATCGCTGCG GTAATCGATG ACCTGACTTC TGCCCGCCCC ATGGACAGGC TCATCTGCGG AGATGTGGGT TTTGGCAAAA CGGAGGTGGC GCTAAGGGCG GCTTTTGTCG CTGTCGCGGA TGGCAGACAG GTCGCGGTAC TGGTTCCTAC CACGCTGCTG GCGGAACAGC ATTTCCAGAA TTTTTCGGAC CGTTTCGGCC TGATTGCGGA AGAATGGCCG GTTAAAATTG CCGAGCTGTC GCGTTTCCGT TCAGGCAAGG AGCAGGCCCA GGCGCTGGCG GGCCTCGCCG ATGGGCAGAT AGACATCGTG ATCGGTACGC ATAAACTGAT CCAGAAAGGC GTCAGATTCA AAAACCTGGG ACTGGTCATC ATCGACGAGG AGCACCGTTT TGGTGTGCGC CATAAGGAAC AGCTGAAAAG CCTCCGCTCC GAAGTGGATG TCCTAACCCT TACCGCCACG CCTATTCCCC GCACCCTGGC CTTGTCATTG GAGGGACTGC GCGATTTCTC CGTCATTGCA ACAGCGCCGC AACGGCGGCT GGCCATCAAG ACCTTTGTAA ACCGTTTTTC CGAGGGAATC ATCCGCGAGG CGTGCCTGCG GGAATTGAAG CGGGGTGGGC AGATATATTT TTTACATAAC GAGGTGAGTA CCATCCAGAC GATGCATGAC AAGCTCGCCC GCCTGCTGCC CGAAGCGCGA ATAGGCATCG CCCACGGACA AATGCGGGAA CGCGAGCTGG AACATGTGAT GAAAGATTTT TACCAGCAAC GGTTTAATCT GCTGCTCTGC ACAACCATCA TCGAAACCGG CATCGATGTG CCCACTGCCA ATACCATTAT CATTCATCGC GCGGATAAGT TCGGATTGGC GCAACTGCAT CAGCTGCGCG GGCGGGTAGG ACGGTCCCAT CATCAGGCGT ACGCCTACCT GCTGGTACCG GAGGAGGAGG CATTGGGGAC TCAGGCCAGG AAGCGCCTGG AGGCTGTTCA GTCCATGGAA GAGCTGGGGG CCGGCTTCTA CCTCGCCATG CACGATCTCG AGATTCGGGG CGCTGGCGAA GTTCTTGGGG AATCCCAAAG CGGCGAGATG CAGGAAATCG GCTTCACCCT CTACGCCAAT ATGCTGGAAG CAGCCGTGCG ATCACTGAAG GAAGGCAAGG AGCCCGACAT GCAACACCCC CTCGGGGTTG CCACCGAAAT CAACTTGCAT GTTCCCGCGT TGCTGCCTGA GGATTACTGC AGTGATATAC ATGAACGGCT GATCCTGTAC AAACGCATGG CCAATTGCAC CAGCGATGAG CAACTGGATG AAATGCAGAT TGAATTGACG GACCGCTTCG GCCTATTACC GGATCCGGTC AAGGCATTGC TCGATTGCCA CCGTTTACGT ATCGCTGCAG CGCCGCTGGG AATCATTCGT GTTGAGGCAA GCAGCGAATC CATTCAGGTT CAATTTACGC CCAATCCTCC CGTGGATGCG GCAAGGATTG TCGCCCTTCT TCAGCGTAGC CGCGACTATC AGCTTTCCGG ACCTGATCGA TTGAAAATAA AAACGTGCAT CCCGGAGGCG GGAGAACGAG TCAGGCGGAT AATGGACTTG TTTACCGAAT TGGGCACATA A
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Protein sequence | MAFKLTIPSS GSTIRYGHFD GSSDSLALAQ LALEAKKAKP VTIITASALA AQRLLEEIPF FAPELRTRLL PDWETLPYDT FSPHQDLVSE RLATLYQLMN GACDILIVPV TTALYRMPPP EYLAAHTFFL ARGETLDLNA LRSQMTLAGY SHVTQVLSPG EYSVRGGLID LFPMGSPLPY RIDLLDNEIE TIRTFDVDTQ RSVYPVTEIR LLPAREFPLD EEGRTRFRGR FREKFEGDPS RSLIYKDISK GGSPAGIEYY LPLFFEHTAT LFDYLPQTAL LCLHHELYQT VESFWHDTQA RYQLLRGDSD RPLLKPADLF LTTEAFFGAL KPYPRIEIPP EERATKTGGA EVQGLSIPLP PLQIDRRAVN PAEKLSAFIA EFESSGGGRT LLLAESLGRR ELIADHLKQY RLNPDICDNY AQFRASTSPF VLGVGPLHNG FIYPEKGIAF VTESELYARH LHGRGERDSR KTSAVADAVL RDLSEIKAGD PVVHEQHGIG RYLGLVSMDL GEGETEFLSL EYASGDKLYV PVSQLHLIGR YSGASPESAP LHKLGSGQWD KAKRKAMQQV RDTAAELLNI YAQRAARVGH AFRLKEQDYE AFVEGFGFEE TPDQATAIAA VIDDLTSARP MDRLICGDVG FGKTEVALRA AFVAVADGRQ VAVLVPTTLL AEQHFQNFSD RFGLIAEEWP VKIAELSRFR SGKEQAQALA GLADGQIDIV IGTHKLIQKG VRFKNLGLVI IDEEHRFGVR HKEQLKSLRS EVDVLTLTAT PIPRTLALSL EGLRDFSVIA TAPQRRLAIK TFVNRFSEGI IREACLRELK RGGQIYFLHN EVSTIQTMHD KLARLLPEAR IGIAHGQMRE RELEHVMKDF YQQRFNLLLC TTIIETGIDV PTANTIIIHR ADKFGLAQLH QLRGRVGRSH HQAYAYLLVP EEEALGTQAR KRLEAVQSME ELGAGFYLAM HDLEIRGAGE VLGESQSGEM QEIGFTLYAN MLEAAVRSLK EGKEPDMQHP LGVATEINLH VPALLPEDYC SDIHERLILY KRMANCTSDE QLDEMQIELT DRFGLLPDPV KALLDCHRLR IAAAPLGIIR VEASSESIQV QFTPNPPVDA ARIVALLQRS RDYQLSGPDR LKIKTCIPEA GERVRRIMDL FTELGT
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