| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A0541 |
|---|
| Symbol | |
|---|
| ID | 3784724 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosospira multiformis ATCC 25196 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007614 |
|---|
| Strand | - |
|---|
| Start bp | 623868 |
|---|
| End bp | 625124 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637810623 |
|---|
| Product | diaminopimelate decarboxylase |
|---|
| Protein accession | YP_411241 |
|---|
| Protein GI | 82701675 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0019] Diaminopimelate decarboxylase |
|---|
| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGGTT TTCCTTCCTT CAGTTACCGC AATGGGCATT TGTGGGCAGA GTCGGTGCAA
CTGGAGCGCA TCGCGCTTGA ATTCGGCACG CCCTGCTATG CCTATTCGCG CGCGGCGCTG
ACTACAGCCT ACTGTGAATT CGACGATGCC TTCGCAGGAC GCGATCATCT GGTCTGTTAC
GCCGTCAAGG CGAATTCCAA CCTTGGCATT CTCAATCTGC TCGCCCGCCT GGGTAGCGGC
TTCGACATCG TCTCCGGGGG AGAACTTCAG CGGGTATTGA AGGCGGGGGG CGATCCACAG
AAAATCGTTT TTTCGGGTGT GGGCAAGCAG CCTGCGGAAA TGAAAGCGGC GCTCGAAGCG
GGCATACTGT GCTTCAACGT GGAATCGGAA GCGGAGTTGC ATGGGCTGAA CCGCGTGGCC
GGAGAAATGG GCAAGGTTGC GCCGGTGAGC CTGCGGGTGA ACCCGGATGT GGATGCGAAA
ACGCACCCAT ATATTTCCAC CGGACTCAAG GAAAACAAGT TCGGCATTCC TTTCGATGAG
GCGGAGGCGC TTTATGCTTC TGCGCAGGCG CTTGGCAATG TACGGGTGGC CGGTCTCGAT
TGCCATATCG GCTCGCAATT GACCGAACTG GCGCCTTTCA TCGAAACCTG CAAGAAGATG
CTGGGGCTGC TCGACCGGCT GGAGGCGCAA GGGTTGGAGA TCGAGCACCT CGATCTGGGC
GGCGGCCTGG GGATACGTTA TGCCGGGGAA AATCCCCCCT CGGCACGGGA ATATGTCGAG
GCGTTACGCA GCGTGGTGGG CAACCGCAGG CAGAAAATCC TGATCGAACC GGGAAGATCG
CTGGTGGGCA ATGCGGGTGT ACTGCTTACA ACCGTCGAGT ATCTCAAGCC TACGCCGCAT
CGCGATTTCG CCATTGTCGA TGCAGCCATG AACGACCTGA TGCGCCCGGC CTTATATAAG
GCTTACCATG AAATCCTTCC GGTGGTTGCG CGCAACGAAA TGGATGCAAA AACCTATCAG
GTTGTCGGTC CGGTATGCGA AACCGGCGAT TTTCTTGGGC ATGACCGCCA CCTGGCGCTG
GCGCAGGGTG ATCTGCTCGC TGTCATGTCG GCCGGCGCTT ATGGCATGAG CATGAGCTCT
AATTACAATG CGCGTCCACG CGCCGCCGAG GTGATGATCG ATGGCGACCG CATTCATCTC
ATTCGCGAGC GGGAATCGGT CGAGCAATTG ATGGCAGGCG AGAAAATCCT CCCATAG
|
|---|
| Protein sequence | MSGFPSFSYR NGHLWAESVQ LERIALEFGT PCYAYSRAAL TTAYCEFDDA FAGRDHLVCY
AVKANSNLGI LNLLARLGSG FDIVSGGELQ RVLKAGGDPQ KIVFSGVGKQ PAEMKAALEA
GILCFNVESE AELHGLNRVA GEMGKVAPVS LRVNPDVDAK THPYISTGLK ENKFGIPFDE
AEALYASAQA LGNVRVAGLD CHIGSQLTEL APFIETCKKM LGLLDRLEAQ GLEIEHLDLG
GGLGIRYAGE NPPSAREYVE ALRSVVGNRR QKILIEPGRS LVGNAGVLLT TVEYLKPTPH
RDFAIVDAAM NDLMRPALYK AYHEILPVVA RNEMDAKTYQ VVGPVCETGD FLGHDRHLAL
AQGDLLAVMS AGAYGMSMSS NYNARPRAAE VMIDGDRIHL IRERESVEQL MAGEKILP
|
|---|
| |