Gene Nmul_A0392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmul_A0392 
Symbol 
ID3784087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosospira multiformis ATCC 25196 
KingdomBacteria 
Replicon accessionNC_007614 
Strand
Start bp433312 
End bp434640 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content56% 
IMG OID637810468 
Productsun protein 
Protein accessionYP_411092 
Protein GI82701526 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID[TIGR00563] ribosomal RNA small subunit methyltransferase RsmB 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAGGA CGCAGCGTCT CGCCGCCACC ACTGTTGAAA GAGTGGTGAG TGGCGCAAGT 
CTGACAACGG TTTTGCAGGA AACCTGGCGC AGCCACAGCG GCCTCTCCGA CCAGCAGCGC
GGTGCGATTC AGGATTTAAG CTATGGCGTA CTGCGCTTTT ATGGTCAACT GGACATATTG
CTTGGCTTAT TGCTGAACAA ACCCCTGAAG GACCAGAGTT TGCGCTACCT GCTACTGGTG
GGACTGTATC AGCTTCAATA CAGCAAAACG GCGCCGCACG TCGTGGTGGA CAGTGCAGTA
TCCGCTTCTT GCAGCCCCTC GATCGATGGC AGGAATAGCA GGAACATGCT GGATCCCCGC
CATGCGAAAA GTATAGGCGG ACTGGTCAAT GCGATATTGC GCAACTTCTT GCGCAAACGT
CCCGCCCTGC TTGAAAAAAC GGCGGCAACC GAAGTAGGAA GGTATTCCCA TCCACAATGG
TGGATCGACA AACTCCGTGC GCAATATCCC TCCCGCTATC AGGCTGTACT GGAGACAGCC
AATATACGAC CACCTATGGC GCTCAGAGTC AATCAGCGGA GGACAAACGT TGAAGCATAT
CAGAAGCTGC TGCACAATGC CGGACTGAAT GCCCGGCGAC CGGAAAACGA GTGGACAGAA
GAGGCGCTTG AATTATTTCA CCCGGTCCCG GTGGAAAAAC TGCCGGGCTT CGGTCAAGGA
CTGGTATCAG TTCAGGATGT GGCCGCTCAA ATGGCAGCGC CGCTACTCTG TCCCCAGAGC
GGAATGCGGG TGCTGGACGC CTGCGCTGCC CCGGGCGGGA AAAGCGCGCA TCTGCTTGAA
TTGACCGATC TGGAACTGAC CGCGGTTGAC AATGATGGCG AGCGGTTAGA ACGGCTAAAG
CAGAATTTCA CTCGTCTCGG CCTCAAGCCT TATCGCATCA TTCACGGCGA CGCCACGCAC
CCGGGGGAGT GGTGGGATGG AAGGCCATTC GATCGTATCC TGGCTGATGC CCCCTGCTCT
GCGTCCGGGG TGGTGCGCCG TCACCCCGAC ATCAAATGGC TGCGACGCGA AAGCGACCTG
GCGCAGTTTG CCGAGATACA ACGTAAAACC CTCGATGCCC TTTGGCAAAC CCTGGTCAAA
GGCGGTAAAT TGCTCTATGT CACTTGTTCC ATATTCGCAG AGGAAAACGG TCTTCAGGTG
GAAAGCTTCC TGAATCATCA TCCGGATGCT CGTCTACTGC CCTTTTCCGT GCCGGAAATC
GTGGAGGGCC AGTTGTTGCC GGACCTCCAT CACGACGGTT TTTTTTATGC ATTGCTTGAA
AAGCTCTGA
 
Protein sequence
MIRTQRLAAT TVERVVSGAS LTTVLQETWR SHSGLSDQQR GAIQDLSYGV LRFYGQLDIL 
LGLLLNKPLK DQSLRYLLLV GLYQLQYSKT APHVVVDSAV SASCSPSIDG RNSRNMLDPR
HAKSIGGLVN AILRNFLRKR PALLEKTAAT EVGRYSHPQW WIDKLRAQYP SRYQAVLETA
NIRPPMALRV NQRRTNVEAY QKLLHNAGLN ARRPENEWTE EALELFHPVP VEKLPGFGQG
LVSVQDVAAQ MAAPLLCPQS GMRVLDACAA PGGKSAHLLE LTDLELTAVD NDGERLERLK
QNFTRLGLKP YRIIHGDATH PGEWWDGRPF DRILADAPCS ASGVVRRHPD IKWLRRESDL
AQFAEIQRKT LDALWQTLVK GGKLLYVTCS IFAEENGLQV ESFLNHHPDA RLLPFSVPEI
VEGQLLPDLH HDGFFYALLE KL