| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A0301 |
|---|
| Symbol | |
|---|
| ID | 3785334 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosospira multiformis ATCC 25196 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007614 |
|---|
| Strand | + |
|---|
| Start bp | 325227 |
|---|
| End bp | 326288 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637810377 |
|---|
| Product | polysaccharide deacetylase |
|---|
| Protein accession | YP_411001 |
|---|
| Protein GI | 82701435 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.351436 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCCTTGTT TGCTTGCTGC TCGTGTCCGC TTTTCTTCCA TGAGAACTTC TGAATATGAT
CACGTGGACA ATCTGGTAAA TCAGGTGCCA CTTTGGCCGC TGTTGACGAG CCGTGCGATG
TTGCATCTGC TTTCCCCCGG GGGGCGGCGC GCCCGCCTGT CCATACTGAT TTATCATCGG
GTGCTGCCCT GCCAGGATCC ACTTTTTCCG GAGGAGAGTC ATGCCCGGTC CTTCGATCAG
CAGATGGAGC AGCTTGCGGC CTGTTTCAGG GTCATATCTC TCGGGGAGGC GATTCGCGGC
CTTCGTAATG GAACGCTGCC CCCACGTGCT GCCTGTGTCA CTTTCGATGA CGGTTATGCC
GATAATGCGG AAATCGCTTT GCCGATTCTG AAAAAACGCG GTATTCCTGC TACTTTTTTC
GTGGCAACCG GTTTTCTCGA CGGAGGCCGG ATGTTCAACG ATACCGTGAT AGAATTGATA
CGGGGTGCGC CGGGAAGCAC CGTGGATCTT GATAGCCTGG GCTTGGGAAG GTTTCCGATC
GGAACTGTTT CCGAGCGTCG TCAAACTATT CACCAGTTAT TGGGCAAGCT CAAGTATCTG
CCCTCCGCAT TACGGCAATC GACCGTGGAG GCAATGTCGG CGTCAATTCC AGTCATGCTG
CCTGACAATC TCATGATGAC CTCCGAGCAG GTCAGAATGA TGCACAATGC AGGAATGGAA
ATAGGTGGGC ATACCGCCAG TCATCCCATC CTGGCAAAAA TGGAGAGCAG AGCAGCTTGT
GCTGACATTG CCACCGGCAA AGAGATGCTG GAGGCCATTA TTCGCGCTCC GGTGCGGTTT
TTTGCCTACC CGAATGGGAA GCCGGGGAGA GACTATTTGC CCGATCACGT CCGGATGGTA
AAGAAGCTGG GGTTTGACGC GGCAGTCTCG ACTGCCCATG GAGCAGCAAG AAAAGGAAGC
GACCTCCATC AGCTCCCTCG GTTTACTCCC TGGGATAGGC GCCCGCTGCG ATTCGCCCTT
CTGATGGCGC GAAATATGCT GAAAACTGGA GAAACAGTTT AA
|
|---|
| Protein sequence | MPCLLAARVR FSSMRTSEYD HVDNLVNQVP LWPLLTSRAM LHLLSPGGRR ARLSILIYHR
VLPCQDPLFP EESHARSFDQ QMEQLAACFR VISLGEAIRG LRNGTLPPRA ACVTFDDGYA
DNAEIALPIL KKRGIPATFF VATGFLDGGR MFNDTVIELI RGAPGSTVDL DSLGLGRFPI
GTVSERRQTI HQLLGKLKYL PSALRQSTVE AMSASIPVML PDNLMMTSEQ VRMMHNAGME
IGGHTASHPI LAKMESRAAC ADIATGKEML EAIIRAPVRF FAYPNGKPGR DYLPDHVRMV
KKLGFDAAVS TAHGAARKGS DLHQLPRFTP WDRRPLRFAL LMARNMLKTG ETV
|
|---|
| |