Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmul_A0202 |
Symbol | |
ID | 3785875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosospira multiformis ATCC 25196 |
Kingdom | Bacteria |
Replicon accession | NC_007614 |
Strand | + |
Start bp | 210885 |
End bp | 214049 |
Gene Length | 3165 bp |
Protein Length | 1054 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637810273 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_410902 |
Protein GI | 82701336 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATACAG AGATCCACAA TCCCCATATC CCTGGCGGGC GTCCGCCCTC CCGACCGGCT ATCGCCGCTC TCACTTTCGT GATTTTTATG TCGCTTACCC TAGCGAGCTG GTCTGTCGTA CAGGATCTGC AGGAACGGCA TGAAAATACT CGATTTGATA AGCGGGTAGC AGAAGTCATT CACAAGATCG AGCATCACTT TTCAGGGTAT GAACAGGTGT TGAAAGGGGC GCTGGGACAC CTGCTTGCCT CCCCCTCCGT TTCCCGGAAC GAATGGCGCA CATATGTGAA TGCACTGCGA ATAAACGACC GGTATCCGGG CATTCACGGT ATCGGTTTCG CCAAATATAT CCCGCGGTCA GGGCTTGCCG CCCATACTGA AGAAGTACGC GCGGAAGGTT TTCCGTCCTA CAAAGTCTGG CCTGGAACCC CGCGCCAGGA GTATACCTCC ATCATATATC TCGAACCCTT TACGGGATCA AATCTGCGTG CGTTCGGATA TGACATGTTT TCAAATGCTG TTCGACGCGC CGCCATGTCC CGTGCGCGCG ATACGGGAGA AGTCGCGCTT ACCCGCAAAG TGAAGCTCGT GCAGGAAACC GGTGAGGATA TTCAGGCAGG CGTCCTTATG TATCTCCCCT ACTATGGTGC TGCAAATCTG CCGAAAACGG TGGAAGAAAG GCGCGCATCA TTGGGTGGCT ATGTATATGC TCCGTTCAGA ATGGTTGACT TCGTACGCGC CACCCTTGGG AGCGAACTTG ATATCCTCGA TCTGAGAATT TTCGATGGAA AAGCAATGGC AGAGGATTCT CTTCTTTTCG ACAGCGTAAA ACATCGATCT GGGCCGTCGC CCGTACCTAA ATTTAAACGG GTCATACCTA TATCCTTATA TGGTCAAACA TGGGCGCTCG AAGCATCCTC CCGTCCTGCA TTTGAAAAAG CAATAAAGAA TTACGAGGCA CTCCTCGTTC TGCTGGGCGG ATTCGTGGTC AGCATGTTGA CTGCCATGGT TTCCTTTGTC CTTTCGGGGA ACAAAGAGAA GGCTGCGGCA CTGGGACATG TAAATAAAAA ACTGCTGTTG GCCATGGAGG AGCAGCAGGC AACAACACGC GAGCTTTCAA ATGCGAAGCT TCGCACAGAG AGGATTTTGG AAAGTATTAC TGACGCGTTT TATACCCTGG ATCGGGAATG GCGTTTCACC TATGTGAATA AGGAAGCCGA GAATCTGCTA CAGCGTAATC GCGAGGATCT TCTGGGAAGG GTGTGCTGGG AAGAATTCAA AGAGACAGCA GGAACAACCT TTGATCGCGA ATACCATCGG GCACTCATGG AAAACAGGAC AGTGACGTTT GAGGAATTCT ACGTTCCACT GGATGAATGG TTCGAGGTAC ATGCTTATCC ATCTGAAGAA GGCTTGACTG TTTATTTCCG CGATATTACC GAACGCAAGG AGTCTGAGCA GGCGCGGCAG GAAGCCCACG TTCGTATCCG CCAGCAAGCT TCCCTTCTCG ACAAGGCAAC GGATGCGATC ATTGTTTTCG GAATGGATAA TTGTATTGAA TTCTGGAACC AAGGCGCGGA ACGGCTCTAT GGATGGACGT CCGAAGAGGT GATGGGAAGA GAGGTTGAGA TGTTATATGA CAATGTTGCC GTTTTCGATG AAGCAAACCG GGCGCTGCTC AGTTCCGGCG AATGGAGAGG AGAACTTGCG CAGCGACGCA GGGACCAGAG TATGCTGAAC GTGGAGGCCC ATTGGACGCT GGTCAGAAAT GACGACGGAG AGCCTCAGGC TATCTTCGCG ATCAATACAG ATATTACCCA GCGCAAGAGC GCCGAGAACG AAATCCTGCA TCTCGCCTTA TACGATTCTT TGACGGGTTT GCCCAATAGG CGGCTCTTGC TGGATCGCCT CGGGCATGCA TTAGCGGTGA GTGCTCGCAA TCAGCGCATG GGCGCGTTAC TGTTTATCGA CCTCGATAAC TTCAAGCTGC TGAATGATAC GCTGGGGCAT GACATGGGTG ACCTGCTGCT TCGGCAGGTC GCGCCGCGCC TGTCCTCTTG CGTACGCGAA AGCGATACGG TAGCTCGCTT GGGCGGAGAT GAGTTTGTGG TGATATTGAT GGGTGACTTT GGCGAAGATC ATGATGAGGC TCTTACCCAG ATAAGCACCA TTTGCGAAAG GATACGCAGC GCCTTCATTC AGCCGTTTAA TCTCGATCCA TACATCCATC ACATTACACC CAGCATCGGT ATTGCACTGT TTAACGATCA GTCCCAAACA ACAAACGAAC TCCTGAAGCG GGCAGACCTC GCTATGTATC AGGCAAAAGC ATCGGGCCGC AATGCCATGC GTTTTTTCGA TCCGGACATG CAAGCAGCAA TGAATGCCCG AGCCATTCTC GAGTCGGAGT TATACAAAAG CTGGGAGAGA AACGAGTTCA TTCTCCATTA TCAGCTGCAG GTGGACAGCC GGGGGATTAT CGGTGCTGAA GCGCTGGTGC GATGGCAGCA CCCGCGCCGG GGTCTTTTGC CCCCCTCCGA ATTCATTCCA CAGGCAGAGG AAACCGGTCT GATTCTTCCT TTGGGCGAGT GGGTGCTGGA AACCGCATGC AACCAACTGG CAAGCTGGGC ACTTCAACCG GAGACAGTAC AGCTCAATCT CTCTGTGAAT GTCAGTTCCC TCCAGTTTTG CCAGCCCGAT TTTGTCGAGC AAGTAATTTC AATACTCGAC CGCACAGGCG CCAATCCACA AAGACTCAAG CTTGAGCTTA CCGAAAGCAT TCTGGTCCAT GATATGGACG ATACCATTGC AAAAATGATG ACACTCAAAG CCCGAGGGGT GGGCTTTGCG CTGGATGACT TTGGCATCGG CTATTCCTCA CTCTACTATC TGAAACGTCT GCCGCTGGAT TGGGTAAAAA TTGATCGGTC ATTTGTGAGA GACGTGCTGA CCGATAATAA TGATGCAACG ATCGTTCGAA CGATCCTGCT CCTTGCTAAA AGCATGGGGT TGGCGGTAAT TGCCGAAGGA GTGGAAACCG GAGCACAAAA AGATTTTCTT GCTAGCCACG GTTGTACTGC TTATCAGGGG TACCTGTTCA GCCGGCCTCT GCCTTTAGAG CAGTTTGAGC GGTTTGTGCA GCCGGCTGCG GGAGGGGCTG TGTAA
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Protein sequence | MDTEIHNPHI PGGRPPSRPA IAALTFVIFM SLTLASWSVV QDLQERHENT RFDKRVAEVI HKIEHHFSGY EQVLKGALGH LLASPSVSRN EWRTYVNALR INDRYPGIHG IGFAKYIPRS GLAAHTEEVR AEGFPSYKVW PGTPRQEYTS IIYLEPFTGS NLRAFGYDMF SNAVRRAAMS RARDTGEVAL TRKVKLVQET GEDIQAGVLM YLPYYGAANL PKTVEERRAS LGGYVYAPFR MVDFVRATLG SELDILDLRI FDGKAMAEDS LLFDSVKHRS GPSPVPKFKR VIPISLYGQT WALEASSRPA FEKAIKNYEA LLVLLGGFVV SMLTAMVSFV LSGNKEKAAA LGHVNKKLLL AMEEQQATTR ELSNAKLRTE RILESITDAF YTLDREWRFT YVNKEAENLL QRNREDLLGR VCWEEFKETA GTTFDREYHR ALMENRTVTF EEFYVPLDEW FEVHAYPSEE GLTVYFRDIT ERKESEQARQ EAHVRIRQQA SLLDKATDAI IVFGMDNCIE FWNQGAERLY GWTSEEVMGR EVEMLYDNVA VFDEANRALL SSGEWRGELA QRRRDQSMLN VEAHWTLVRN DDGEPQAIFA INTDITQRKS AENEILHLAL YDSLTGLPNR RLLLDRLGHA LAVSARNQRM GALLFIDLDN FKLLNDTLGH DMGDLLLRQV APRLSSCVRE SDTVARLGGD EFVVILMGDF GEDHDEALTQ ISTICERIRS AFIQPFNLDP YIHHITPSIG IALFNDQSQT TNELLKRADL AMYQAKASGR NAMRFFDPDM QAAMNARAIL ESELYKSWER NEFILHYQLQ VDSRGIIGAE ALVRWQHPRR GLLPPSEFIP QAEETGLILP LGEWVLETAC NQLASWALQP ETVQLNLSVN VSSLQFCQPD FVEQVISILD RTGANPQRLK LELTESILVH DMDDTIAKMM TLKARGVGFA LDDFGIGYSS LYYLKRLPLD WVKIDRSFVR DVLTDNNDAT IVRTILLLAK SMGLAVIAEG VETGAQKDFL ASHGCTAYQG YLFSRPLPLE QFERFVQPAA GGAV
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